Protein Alignment CG12344 and Gabra2

DIOPT Version :9

• Sequence 1: NP_001286298.1
• Gene: CG12344 / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_017454595.1
• Gene: Gabra2 / 289606
• RGDID: 61856
• Length: 504
• Species: Rattus norvegicus
• Alignment Length: 481
• Identity: 129/481 - (26%)
• Similarity: 212/481 - (44%)
• Gaps: 94/481 - (19%)

  Fly    13 FGLGFILMWLS--------EATEAHMNYTAKPRVV--LPPNYVKEIRPPSKKGSPVIVDF-SIFV 66
            |.|..:|:|..        :..||..|.|...|::  |...|...:||  ..|..:...| :|:|
  Rat    65 FPLLVLLVWNPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRP--GLGDSITEVFTNIYV 127

  Fly    67 VDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSK-- 129
            .....::..||::.:|:|..|:|.:.||:     |:...:.:.|...:....|.||.:|.|.|
  Rat   128 TSFGPVSDTDMEYTIDVFFRQKWKDERLK-----FKGPMNILRLNNLMASKIWTPDTFFHNGKKS 187

  Fly   130 IAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLR 194
            :|...|:.:|.  :.:..:.|:.|..|:.....|.|..:.:|||...||:...|::....:|...
  Rat   188 VAHNMTMPNKL--LRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYI 250

  Fly   195 W----SDSGVTLNPE-LKLLQYN-LGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHLIQT 253
            |    ||| |.:.|: .:|.||: |||.:..|.    :....|.::.:|.:|..:|:||:.:|||
  Rat   251 WTYNASDS-VQVAPDGSRLNQYDLLGQSIGKET----IKSSTGEYTVMTAHFHLKRKIGYFVIQT 310

  Fly   254 FAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DIPPVAYVKALDLWMAGCML 316
            :.|..:.|:||..||||..:::|.|....||.:||:.|:...|  .:|.|||..|:|.::|.|..
  Rat   311 YLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 375

  Fly   317 SVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRK-------- 373
            .||:||.||..|...                     .::|.     :|:|.:|.:.|
  Rat   376 FVFSALIEFATVNYF---------------------TKRGW-----AWDGKSVVNDKKKEKGSVM 414

  Fly   374 ----------ATQTPT---TPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREIDKVS 425
                      |...|.   .|..:::..:...|:|.::..........|...|.|     ||::|
  Rat   415 IQNNAYAVAVANYAPNLSKDPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSK-----IDRMS 474

  Fly   426 RAVFPILFFVFVLLYW-------PIL 444
            |.|||:||..|.|:||       |:|
  Rat   475 RIVFPVLFGTFNLVYWATYLNREPVL 500

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12344	NP_001286298.1	LIC	8..441	CDD:273305	125/469 (27%)
Gabra2	XP_017454595.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1057372at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910