Sequence 1: | NP_001286298.1 | Gene: | CG12344 / 36145 | FlyBaseID: | FBgn0033558 | Length: | 449 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_620252.1 | Gene: | Gabrr3 / 192258 | RGDID: | 621564 | Length: | 464 | Species: | Rattus norvegicus |
Alignment Length: | 500 | Identity: | 134/500 - (26%) |
---|---|---|---|
Similarity: | 217/500 - (43%) | Gaps: | 107/500 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ISFGLGFI-LMWL------SEATEAHMNYTAKPRVVLPPNYVKEIRP---------PSKK----- 54
Fly 55 -------------GSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDD 106
Fly 107 YVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYP 171
Fly 172 MDIQVCPIYIESFSSNNQKVKLRWSDSGVTLNPE--LKLLQYNLGQPLELEESDGY-MPEKVGNF 233
Fly 234 SRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--A 296
Fly 297 DIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVL-DVQYQYQVNRIPKVLPMRISNMEKGQCAT 360
Fly 361 VASWEG--------------------GAVRSRKATQTPTTPG----QTSLQGNGGPPKPARRQSL 401
Fly 402 LSVAWTDTDTGVEKIMWRE---IDKVSRAVFPILFFVFVLLYWPI 443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12344 | NP_001286298.1 | LIC | 8..441 | CDD:273305 | 131/496 (26%) |
Gabrr3 | NP_620252.1 | LIC | 58..463 | CDD:273305 | 121/440 (28%) |
LGIC_ECD | 79..264 | CDD:355788 | 50/191 (26%) | ||
Cys-loop | 181..195 | CDD:349787 | 6/13 (46%) | ||
Interaction with SQSTM1. /evidence=ECO:0000269|PubMed:12431995 | 344..445 | 24/129 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |