DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and lgc-58

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001368738.1 Gene:lgc-58 / 191637 WormBaseID:WBGene00001587 Length:553 Species:Caenorhabditis elegans


Alignment Length:527 Identity:118/527 - (22%)
Similarity:216/527 - (40%) Gaps:162/527 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PPSK--KGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLP 112
            ||.:  |....:|:.::::..::|...:.|||::|::..|.|.:.||       ...:....|:.
 Worm    46 PPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRDPRL-------AHNETRRVLVK 103

  Fly   113 E--VFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQ 175
            :  |....|:||.||.|::|||...:|.....|.:..:.::.|..|:..::.|.:..:.:|:|.|
 Worm   104 DKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQ 168

  Fly   176 VCPIYIESFSSNNQKVKLRW-SDSGVTLNPELKLLQYNLGQPLELEES--DGYMPEKVGNFSRLT 237
            .|.:.|.|::...:::.::| .|..:|.||.:.:...::   ::|...  ||..  ..|.:|.:|
 Worm   169 RCHLRILSYAYTTEQLVIKWKEDEPITRNPNIAMSDMHI---VDLYPGLCDGNY--STGTWSCVT 228

  Fly   238 VYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DIPP 300
            ..|..:|:|.||::|::.|::|:|::|||||||.::|:|.||:|.:|.:|||.|....|  .:|.
 Worm   229 AEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPARVSLAITTLLTLSTQANAARMALPE 293

  Fly   301 VAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVASWE 365
            |:|:||:|:||..||:.||..:.||.:|.....|.: :.:|....:.| .|::|           
 Worm   294 VSYMKAIDVWMGACMMFVFGVMIEFTIVNYAQRQGR-KWHRTDAEIVM-ASSLE----------- 345

  Fly   366 GGAVRSRKATQTPT--------------------------TPGQTSLQGNG-------------- 390
              :|:|..|.:.|:                          .|.|.::....              
 Worm   346 --SVKSGNAEKKPSRGDLGAHARHLFLRLRTNERQHLVEDPPEQIAMNDTAYDTVSQAYSNSFSD 408

  Fly   391 -------GPPK-----------PARRQSLLSVAWTDTDTGVEKIMWRE----------------- 420
                   .||:           ..::::.||..|.::|.......|.|                 
 Worm   409 EEAAPVVQPPQNEDAEAQEEVWAEQKETNLSEVWKESDPAERLAHWNEKENDASSPLMGNGRAHV 473

  Fly   421 ---------------------------------------------------IDKVSRAVFPILFF 434
                                                               ||:.||.:||:.|.
 Worm   474 RYGAAEKMKNRKCNDSSRKKEKWSSAIKQIQKHKRNGSVFGKIAGRNRAKKIDQTSRWIFPLTFI 538

  Fly   435 VFVLLYW 441
            :|.|.||
 Worm   539 IFNLTYW 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 116/525 (22%)
lgc-58NP_001368738.1 LIC 30..548 CDD:273305 118/527 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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