Protein Alignment CG12344 and lgc-42

DIOPT Version :9

• Sequence 1: NP_001286298.1
• Gene: CG12344 / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_497489.3
• Gene: lgc-42 / 189722
• WormBaseID: WBGene00021437
• Length: 412
• Species: Caenorhabditis elegans
• Alignment Length: 423
• Identity: 108/423 - (25%)
• Similarity: 190/423 - (44%)
• Gaps: 80/423 - (18%)

  Fly    49 RPPSKKG---SPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTL 110
            :|..:.|   :|:.|.|..:|..:.:....:|.:.:||:::..|       .||.....:....|
 Worm    29 KPMPRNGNPKAPLQVHFGFYVESLGNFRATEMTYDMDMYLYMSW-------QDDSMRHNETEHVL 86

  Fly   111 L--PEVFENFWQPDPYFLNSKIAEIATLT-HKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPM 172
            :  .::.:..|.||.||.|::.|....:| |.| ::.:....|:.|..|:...:||.::.:.||:
 Worm    87 VNDKDILDKIWLPDLYFANARTAYFHKVTVHNF-NMFISPQGTISYGTRVTLNLACNLDLKDYPL 150

  Fly   173 DIQVCPIYIESFSSNNQKVKLRW-SDSGVTLNPELKLLQYNLGQPLELEESDG-------YMPEK 229
            |.|.|.|.:.|::....::.:.| .:..:..|||:.|.:::: :.|:.:..:|       :...:
 Worm   151 DYQTCYIKVISYAHVKNEMNVSWFPNDPIRFNPEIDLPEFHI-RALDKDYCNGVFLYTLTHNSSR 214

  Fly   230 VGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFT 294
            ||.||.|....:.:|.||.||:|::.|:.|:|.:||.|||:...|:|.||:|..|.:|||.|...
 Worm   215 VGEFSCLLGMLKLKRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQGN 279

  Fly   295 GA--DIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQ 357
            |.  .:|.|:|.||:|.:...|||.:|..|.||..|.    .|..:.|:...:       .||.|
 Worm   280 GIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAAVN----SYMRRANKYNHM-------AEKIQ 333

  Fly   358 CA-----TVASWEGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIM 417
            .|     .:|.::           :....|.|...||                   .:.....:|
 Worm   334 SAYGGKPIIADYD-----------SDYEEGPTKYYGN-------------------LNKNSAHLM 368

  Fly   418 WR---------EIDKVSRAVFPILFFVFVLLYW 441
            ::         .|||.:|..||.:|.:|.:.||
 Worm   369 YKALKFSRKALSIDKAARFAFPCVFAIFNVFYW 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12344	NP_001286298.1	LIC	8..441	CDD:273305	106/421 (25%)
lgc-42	NP_497489.3	Neur_chan_LBD	36..192	CDD:280998	38/163 (23%)
		Neur_chan_memb	239..401	CDD:280999	53/202 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910