Protein Alignment alka and lgc-39

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_504821.3
• Gene: lgc-39 / 184265
• WormBaseID: WBGene00017314
• Length: 563
• Species: Caenorhabditis elegans
• Alignment Length: 446
• Identity: 122/446 - (27%)
• Similarity: 208/446 - (46%)
• Gaps: 50/446 - (11%)

  Fly    39 VLPPNYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEE 103
            |:...|...:.|...:|....|..::::..::|...:.|||.|||::...|.:.||       ..
 Worm   129 VVEDGYNMFMAPGQSQGKRTDVHVAVYIESMSSFKAQSMDFEVDMYLAMGWFDRRL-------AH 186

  Fly   104 GDDYVTLLPE--VFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQME 166
            ...:..|:..  :.:..|.||.||:|||.|.:..:|.....|.:|.:..:....|:...::|.|:
 Worm   187 NCTHPILVTSKLIADRIWYPDLYFVNSKYAYLQEVTTPNLMVIVYPDGLIFKTMRLDVTLSCMMD 251

  Fly   167 FQLYPMDIQVCPIYIESFSSNNQKVKLRWSDS----GVTLNPELKLLQYNLGQPLELEESDGY-M 226
            .:|:|:|.|.||:.|:||:...|.|.|.|.|.    .:..||::||....:.....::.:..| |
 Worm   252 LKLFPLDYQECPLTIQSFAYIEQIVNLTWRDDPPNFPIGFNPDIKLNDMQITNKRFVKCAGPYPM 316

  Fly   227 PEKVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVT 291
            ......:|.:..|...:|.:..|:|||:.|:.::|.:||.||||...|.|.|::|.:|.:|||.|
 Worm   317 FRGEAAWSCIQGYIVMKRLVLFHIIQTYIPTGMLVSISWMSFWLDPRASPARISLTITSLLTLTT 381

  Fly   292 MFTGA--DIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVL-----------DVQYQYQVNRIP 343
            |..||  |:|.|:|:||||:|:......:|..|.|:..|...           ::.|:.:|....
 Worm   382 MSNGARQDLPQVSYIKALDIWLTFSQALIFLVLLEYSFVSYYMTKRTTDCSHRNMFYEERVQECK 446

  Fly   344 KVLPMRISNMEKGQCATVASWEGGAV-RSRKATQTPTTPGQTSLQGNGG-----PPKPARRQSLL 402
            :....|.|.:...:.....:.||..: |::|:.|...|.|.::......     .|.|:|
 Worm   447 REEKARKSIVNNNKPVIANNTEGSDLNRNKKSQQFSLTHGISACLNESSALMSVTPVPSR----- 506

  Fly   403 SVAWTDTDTGV---------EKIMWREIDKVSRAVFPILFFVFVLLYWPILLMKSS 449
              .:|..||..         |:|.:: ||:.||.:||.:|.:|.:.||.....:||
 Worm   507 --LFTKFDTNKPCARCSEKNERIAFK-IDEYSRWLFPTVFSLFCVSYWLYFTWRSS 559

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	118/436 (27%)
lgc-39	NP_504821.3	LIC	119..554	CDD:455710	120/439 (27%)