DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and gab-1

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_499661.2 Gene:gab-1 / 176691 WormBaseID:WBGene00001512 Length:550 Species:Caenorhabditis elegans


Alignment Length:510 Identity:125/510 - (24%)
Similarity:215/510 - (42%) Gaps:141/510 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL----EIPDDIFEEGDDYVTLL 111
            |...|..:::...|.:...:||:..|||:.:.|::||.|.:.||    |||       .|.:||.
 Worm    71 PGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIP-------IDEMTLS 128

  Fly   112 PEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQV 176
            .|..:|.|.||.:..|.|.:.:..:|.:...:.:..:..|.|..|:.:.::|.|..:.:|:|.|.
 Worm   129 GEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQN 193

  Fly   177 CPIYIESFSSNNQKVKLRWSDSGVTLNPELKLLQYNLGQPLE---LEESD-------GYMPE--- 228
            |.:.|||:.....:|.::|:                  .||.   :|::|       |:..|   
 Worm   194 CTVEIESYGYTTSEVLMKWN------------------YPLAVHGVEQADVPQFTITGFHTEDSI 240

  Fly   229 ---KVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLV 290
               ..|::.||::.|:..|.:|:.:.||:.|..|:|||||.|||:..:|...||.|.:|.:||:.
 Worm   241 VSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMT 305

  Fly   291 TMFTGA--DIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQY---------------- 337
            |:.||.  .:|.::|||::|:::..|.:.|||||.|:..     |.|.|                
 Worm   306 TISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAA-----VNYSYWGRERGKGGGGNEWPV 365

  Fly   338 ---------------------QVNRIPKVLPMRISNMEKGQCATVASWEGGAVRS----RKATQT 377
                                 .::.:|:....|:..:|:....:..:.:.....|    :|.:.:
 Worm   366 NGANKEDRESAVNVQKWVPSGLMDGVPQPQDRRVEALEEAMSTSNTAAQNNNFESTSKPKKRSSS 430

  Fly   378 PTTP----GQTSLQGNGGPPKP-------------------------------ARRQSL--LSVA 405
            |..|    |.|..:.:..|..|                               .||.:|  ::|:
 Worm   431 PIPPLCRAGNTISEESESPDYPRYSTTSLKGARPHASLNHKTHHLKGRSSARAKRRMTLARMNVS 495

  Fly   406 WTDTDTGVEK--------IMWRE---IDKVSRAVFPILFFVFVLLYWPILLMKSS 449
            ...:.:|:.:        |..|:   |||.||.|||:.|.||.|.||...:|..|
 Worm   496 MKQSISGIGRRARKVIPTIRVRDVNLIDKYSRVVFPVCFIVFNLFYWSYYMMVPS 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 121/500 (24%)
gab-1NP_499661.2 LIC 67..545 CDD:273305 123/503 (24%)
Neur_chan_LBD 68..259 CDD:280998 52/212 (25%)
Neur_chan_memb 268..542 CDD:280999 66/278 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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