DRSC/TRiP Functional Genomics Resources

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Protein Alignment alka and unc-49

DIOPT Version :10

Sequence 1:NP_610619.2 Gene:alka / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001022785.1 Gene:unc-49 / 176472 WormBaseID:WBGene00006784 Length:506 Species:Caenorhabditis elegans


Alignment Length:517 Identity:126/517 - (24%)
Similarity:209/517 - (40%) Gaps:142/517 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LSEATEAHMN----YTAKPRVVLPPNYVKEIRPPSKKG-SPVIVDFSIFVVDINSINVEDMDFRV 81
            :::..::|:|    .:...|:.....|.|.:||  :.| .||.|..:|.|..|::::..||||.:
 Worm    21 VTQDEDSHINTQLLSSVLDRLTNRTTYDKRLRP--RYGEKPVDVGITIHVSSISAVSEVDMDFTL 83

  Fly    82 DMFIHQRWLESRL-----------EIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSK--IAEI 133
            |.::.|.|.:.||           ||  |....|.||:       :..|:||.:|.|.|  ...:
 Worm    84 DFYMRQTWQDPRLAFGSLDLGLSKEI--DSLTVGVDYL-------DRLWKPDTFFPNEKKSFFHL 139

  Fly   134 ATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDS 198
            ||..:.|  :.:..:.||..:.|:.....|.|:.:|:|||.|.|.:.|||:....:.:...|...
 Worm   140 ATTHNSF--LRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYETKDIDYYWGKK 202

  Fly   199 GVTLNPELKLLQYNLGQPLELEESDGYM-----PEKVGNFSRLTVYFRFERQIGHHLIQTFAPSS 258
            ...|  |:..::::..|..:.:.:..::     ....|.:.||.:.....|.:|.:.:....||.
 Worm   203 RTDL--EITAVKFDTFQLPQFQPTLYFVNTTKAETSSGKYVRLALEVILVRNMGFYTMNIVIPSI 265

  Fly   259 LVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGAD--IPPVAYVKALDLWMAGCMLSVFAA 321
            |:|.:||.||||..:|.|.||.|.||.:||:.|:.|..:  :|.|:|||.||:::..|.:.|||:
 Worm   266 LIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFAS 330

  Fly   322 LAEFVVVKVLDVQY------------QYQVNRIP--KVLPMRISN-------------------- 352
            |.|:.:|..::.:.            |.|.|.:|  ...|...:|                    
 Worm   331 LLEYAIVSYMNKRLVLRREKRRKAAEQQQRNEMPMFNASPKAANNNSYEMTLMSQNSTPAKSYVQ 395

  Fly   353 ------------------MEKGQCATV--------------ASWEGGAVRSRKATQTPTTPGQTS 385
                              .|...|.|:              ..|.....|.:||::|        
 Worm   396 ADLYFAGHNSSMNPLMEIPENCDCRTIPMMQHPRLVTDGAHTLWPAPFARPKKASKT-------- 452

  Fly   386 LQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPILLMK 447
                            ....||..          :|||:||..||:.|.:|.::||  |.||
 Worm   453 ----------------CCQRWTPA----------KIDKLSRYGFPLSFSIFNIVYW--LYMK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alkaNP_610619.2 LIC 8..441 CDD:455710 121/509 (24%)
unc-49NP_001022785.1 LIC 37..484 CDD:455710 121/497 (24%)

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