DRSC/TRiP Functional Genomics Resources

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Protein Alignment alka and glc-2

DIOPT Version :10

Sequence 1:NP_610619.2 Gene:alka / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_491470.1 Gene:glc-2 / 172103 WormBaseID:WBGene00001592 Length:434 Species:Caenorhabditis elegans


Alignment Length:462 Identity:117/462 - (25%)
Similarity:205/462 - (44%) Gaps:66/462 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SFGLGFILMWLSEATEAHMNYTAKPRVV--LPPNYVKEIRPPSKKGS---PVIVDFSIFVVDINS 71
            ||.:..:|:.:...|....:..::..::  |..||...:|||....|   .|.|..:|.:..::.
 Worm     6 SFSILLLLLLMPVVTNGEYSMQSEQEILNALLKNYDMRVRPPPANSSTEGAVNVRVNIMIRMLSK 70

  Fly    72 INVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATL 136
            |:|.:|::.:.:...::|::.||...:..|.....::| :|.|.::.|.||.:|...|.|....:
 Worm    71 IDVVNMEYSIQLTFREQWIDPRLAYENLGFYNPPAFLT-VPHVKKSLWIPDTFFPTEKAAHRHLI 134

  Fly   137 THKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDS-GV 200
            ..:...:.:|.:..:.|::|:....:|.|..||||:|.|.|...:.|::.....:...|..| .|
 Worm   135 DMENMFLRIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPV 199

  Fly   201 TLNPELKLLQYNLGQPLE-------LEESDGYMPEKVGNFSRLTVYFRFERQIGHHLIQTFAPSS 258
            .|.|       .:|..|.       ...:|.......|::..|.:...|:||..::|:|.:||::
 Worm   200 QLKP-------GVGSDLPNFILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTT 257

  Fly   259 LVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFT--GADIPPVAYVKALDLWMAGCMLSVFAA 321
            ::|::||.|||:.|.:..|||.|.||.:||:.||.:  .|.:|||:|||.:|:|:..|...||.|
 Worm   258 MIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGACQTFVFGA 322

  Fly   322 LAEFVVVKVLDVQYQ---------YQVNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRKATQT 377
            |.|:..|...|...|         .:..|..:.|.|..:.:.:..| |..::|.......|..:.
 Worm   323 LLEYAFVSYQDSVRQNDRSREKAARKAQRRREKLEMVDAEVYQPPC-TCHTFEARETFRDKVRRY 386

  Fly   378 PTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWP 442
            .|.|...          ||:                       ||..:|.|.|:.|..|.::||.
 Worm   387 FTKPDYL----------PAK-----------------------IDFYARFVVPLAFLAFNVIYWV 418

  Fly   443 ILLMKSS 449
            ..|:.|:
 Worm   419 SCLIMSA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alkaNP_610619.2 LIC 8..441 CDD:455710 113/452 (25%)
glc-2NP_491470.1 LIC 29..419 CDD:455710 111/431 (26%)

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