Protein Alignment alka and Glra4

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_034427.2
• Gene: Glra4 / 14657
• MGIID: 95750
• Length: 456
• Species: Mus musculus
• Alignment Length: 424
• Identity: 144/424 - (33%)
• Similarity: 217/424 - (51%)
• Gaps: 61/424 - (14%)

  Fly    44 YVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL---EIPDDIFEEGD 105
            |...|| |:.||.||.|..:||:....|:....||:||::|:.|:|.:.||   |.|||..:
Mouse    57 YDARIR-PNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSLD--- 117

  Fly   106 DYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLY 170
                |.|.:.::.|:||.:|.|.|.|....:|.....:.::||..|.|:.|:..|::|.|:.:.:
Mouse   118 ----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNF 178

  Fly   171 PMDIQVCPIYIESFSSNNQKVKLRWSDS--GVTLNPELKLLQYNLGQPLELEESDGYMPE--KVG 231
            |||||.|.:.:|||......:...|.:.  .|.:...|.|.|:.|....:|    ||..:  ..|
Mouse   179 PMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDL----GYCTKHYNTG 239

  Fly   232 NFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG- 295
            .|:.:.|.|..|||:|::|||.:.||.|:|:|||.|||:.:||.|.||.|.:|.:||:.|..:|
Mouse   240 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGS 304

  Fly   296 -ADIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEK---- 355
             |.:|.|:||||:|:|||.|:|.|||||.|:..|..:..|:: :..|:.:  ..|...||:
Mouse   305 RASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHK-EFMRLRR--RQRRQRMEEDIIR 366

  Fly   356 -----------GQCATVASWEGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDT 409
                       |.|  :.:.:||             |.:.|...:..||.|     ||....|..
Mouse   367 ESRFYFRGYGLGHC--LQARDGG-------------PMEGSSIYSPQPPTP-----LLKEGETMR 411

  Fly   410 DTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPI 443
            ...|::.  :.||.:||||||..|.||.:.||.:
Mouse   412 KLYVDRA--KRIDTISRAVFPFTFLVFNIFYWVV 443

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	142/420 (34%)
Glra4	NP_034427.2	LIC	9..444	CDD:273305	144/424 (34%)