DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and Gabrg2

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_032099.1 Gene:Gabrg2 / 14406 MGIID:95623 Length:474 Species:Mus musculus


Alignment Length:466 Identity:117/466 - (25%)
Similarity:209/466 - (44%) Gaps:63/466 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FILMWLS--------EATEAHMNYTAKPRVVLPP----------------NYVKEIRPPSKKGSP 57
            :||:.||        ::.:.:.:|.:....||.|                .|..::||.... .|
Mouse    25 WILLLLSLYPGFTSQKSDDDYEDYASNKTWVLTPKVPEGDVTVILNNLLEGYDNKLRPDIGV-KP 88

  Fly    58 VIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPD 122
            .::...::|..|..:|..:|::.:|:|..|.|.:.||:     |......:.|...:....|.||
Mouse    89 TLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLK-----FNSTIKVLRLNSNMVGKIWIPD 148

  Fly   123 PYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSN 187
            .:|.|||.|:...:|.....:.::.:..|.|..|:.....||::...:|||...||:...|:...
Mouse   149 TFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYP 213

  Fly   188 NQKVKLRWSDSGVTLNP--ELKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHL 250
            .:::..:|..|.|.:..  ..:|.|::.   :.|..:...:....|::..::|||...|::|:..
Mouse   214 REEIVYQWKRSSVEVGDTRSWRLYQFSF---VGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFT 275

  Fly   251 IQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DIPPVAYVKALDLWMAG 313
            |||:.|.:|:|:|||.|||:..||:|.|.:|.:|.:||:.|:.|.|  .:|.|:||.|:||:::.
Mouse   276 IQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSV 340

  Fly   314 CMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRKATQTP 378
            |.:.||:||.|:..:      :.:..||.|.   ......:|.....:.|::...:..|..:.|.
Mouse   341 CFIFVFSALVEYGTL------HYFVSNRKPS---KDKDKKKKNPLLRMFSFKAPTIDIRPRSATI 396

  Fly   379 TTPGQTSLQGN----GGPPKPARRQSLLSVAWTDTDTGVEKIMWR---------EIDKVSRAVFP 430
            .....|.||..    |......:..:.....:.|..||.    ||         ::|..:|..||
Mouse   397 QMNNATHLQERDEEYGYECLDGKDCASFFCCFEDCRTGA----WRHGRIHIRIAKMDSYARIFFP 457

  Fly   431 ILFFVFVLLYW 441
            ..|.:|.|:||
Mouse   458 TAFCLFNLVYW 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 115/464 (25%)
Gabrg2NP_032099.1 LIC 68..471 CDD:273305 109/423 (26%)
Neur_chan_LBD 68..271 CDD:280998 47/211 (22%)
Neur_chan_memb 278..468 CDD:280999 57/202 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1057372at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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