DRSC/TRiP Functional Genomics Resources

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Protein Alignment alka and pHCl-1

DIOPT Version :10

Sequence 1:NP_610619.2 Gene:alka / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_061508178.1 Gene:pHCl-1 / 1276287 VectorBaseID:AGAMI1_005729 Length:883 Species:Anopheles gambiae


Alignment Length:572 Identity:121/572 - (21%)
Similarity:209/572 - (36%) Gaps:180/572 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VLPP----------------NYVKEIRPPSK---KGSPVIVDFSIFVVDINSINVEDMDFRVDMF 84
            :|||                .::.::|.|.:   :|: :.|:.|:.::.:.|.:...:.:.|:..
Mosquito   316 LLPPVDDADFCCGMHTPEMAKHIPDMRVPGRPQNRGT-LTVNVSVLLLSLASPDESSLKYEVEFL 379

  Fly    85 IHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNK 149
            :.|:|.:.||...:   :...:|:..:.. .|:.|.||.||:.....:...:...| ::.:|:|.
Mosquito   380 LQQQWFDPRLRYAN---QSQYEYLNAIHH-HEDIWLPDTYFIMHGDFKDPIIPMHF-ALRIYRNG 439

  Fly   150 TVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDSGVTL--NPELKLLQYN 212
            |:.|..|.|.|::||....::|.|..:|...:||.|.....:...|.:...||  :|.|..|...
Mosquito   440 TINYLMRRHLILSCQGRLNIFPFDDPLCSFALESISYEQSAITYVWKNDEDTLRKSPSLTTLNAY 504

  Fly   213 L-----------------GQPLELEESDGYMP------EKVGNFSRLTVYFRFERQIGHHLIQTF 254
            |                 ||.|.:|:.:....      |:.||:|.|.|...|.|....:....|
Mosquito   505 LIQNQTIACPIKASWRAEGQTLSVEDEEFLCNLCQRRFEEQGNYSCLKVDLIFTRDRAFYFTTVF 569

  Fly   255 APSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--ADIPPVAYVKALDLWMAGCMLS 317
            .|..::|..|:.:|||..:|:|.|..:.||.||...|...|  :.:|.|:.:.|:::|...||..
Mosquito   570 IPGIILVTSSFITFWLEWNAVPARSMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCF 634

  Fly   318 VFAALAEFVVVKVL-------DVQYQYQVNRIPKVLPMRISNM---------------------- 353
            ::|:|.|||.|..:       :|.|:...|.:.:.||..:|.:                      
Mosquito   635 IYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQRLPAVLSRIGIILASPLSSRLLPETIDREFH 699

  Fly   354 -----EKGQCATVASWEGGAVRSRKATQTP---------------TTP----------------- 381
                 ||...||.||  ..|..:.:..|||               |.|                 
Mosquito   700 TAIAAEKTTPATAAS--VAAATAGRLAQTPPHRTVAPAATVPPLATAPIAPPIASAAPAAAVLLC 762

  Fly   382 --GQTSLQGNGGPPKPARRQS----LLSVAWTDTDTGVEKIMWRE-------------------- 420
              |..:...:.||....||.:    |......:|..||:|   ||                    
Mosquito   763 EEGLATDASSAGPGLTRRRPTVETKLNEAGLMETSFGVKK---RESGGPNEIVACTSCAGGTSPC 824

  Fly   421 -------------------------------IDKVSRAVFPILFFVFVLLYW 441
                                           ||.::|..||..:.||::.::
Mosquito   825 THSANNGCATETCFVQVRKKEPPHPIRVAKTIDVIARITFPSAYAVFLIFFF 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alkaNP_610619.2 LIC 8..441 CDD:455710 121/570 (21%)
pHCl-1XP_061508178.1 None

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