DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and Glra3

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_536686.3 Gene:Glra3 / 110304 MGIID:95749 Length:464 Species:Mus musculus


Alignment Length:411 Identity:135/411 - (32%)
Similarity:209/411 - (50%) Gaps:28/411 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL---EIPDDIFEEGD 105
            |...|| |:.||.||.|..:||:....||....||:||::|:.|:|.:.||   |.|||..:   
Mouse    57 YDARIR-PNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLD--- 117

  Fly   106 DYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLY 170
                |.|.:.::.|:||.:|.|.|.|....:|.....:.::||..|.|:.|:...::|.|:.:.:
Mouse   118 ----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNF 178

  Fly   171 PMDIQVCPIYIESFSSNNQKVKLRWSDSG-VTLNPELKLLQYNLGQPLELEESDGYMPEKVGNFS 234
            |||:|.|.:.:|||......:...|.|.. |.:...|.|.|:.|.:..:|.....:.  ..|.|:
Mouse   179 PMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHY--NTGKFT 241

  Fly   235 RLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--AD 297
            .:.|.|..|||:|::|||.:.||.|:|:|||.|||:.:||.|.||.|.:|.:||:.|..:|  |.
Mouse   242 CIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAS 306

  Fly   298 IPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVA 362
            :|.|:||||:|:|||.|:|.||:||.|:..|..:..|::       ::|..|.....|.:...:.
Mouse   307 LPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK-------ELLRFRRKRKNKTEAFALE 364

  Fly   363 SW-----EGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREID 422
            .:     ....||..:.:.|....|......:|..||.......:.....|....|.....::||
Mouse   365 KFYRFSDTDDEVRESRFSFTAYGMGPCLQAKDGVVPKGPNHAVQVMPKSPDEMRKVFIDRAKKID 429

  Fly   423 KVSRAVFPILFFVFVLLYWPI 443
            .:|||.||:.|.:|.:.||.|
Mouse   430 TISRACFPLAFLIFNIFYWVI 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 132/407 (32%)
Glra3NP_536686.3 LIC 12..451 CDD:273305 135/411 (33%)
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O75311 235..240 1/6 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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