DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and gabrp

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_017948119.2 Gene:gabrp / 100498164 XenbaseID:XB-GENE-1012959 Length:401 Species:Xenopus tropicalis


Alignment Length:421 Identity:117/421 - (27%)
Similarity:210/421 - (49%) Gaps:50/421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 NYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDY 107
            :|.|.:||...: .|:.:..|:.|..|::::.|:||:...:.:.|||.:.||     :| ||:..
 Frog    13 DYNKYLRPKFNE-KPIEIAVSLEVASIDAVSEENMDYTATINLRQRWTDERL-----VF-EGNRS 70

  Fly   108 VTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPM 172
            :||...:.|:.|.||.|.::||.:.:..:|.:...|.|:.|.||.||.|:...:||:|:...|||
 Frog    71 ITLDARLVESLWVPDTYIVDSKKSFLHDVTVENRLVRLFANGTVLYAIRITTTVACKMDLTKYPM 135

  Fly   173 DIQVCPIYIESFSSNNQKVKLRW--SDSGVTLNPELKLLQYNLGQPLELEESDGYMPEKVGNFSR 235
            |.|.|.:.:||:..:.:.:...|  ::..|.....|:|.||.:.|   ...::....::.||:.|
 Frog   136 DRQTCKLQLESWGYSEKDLTYVWMRANDSVRGMDHLQLAQYTVEQ---YYTTNSIGKDETGNYPR 197

  Fly   236 LTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DI 298
            |.:.|...|.:.:.:::|:.||:|:|:|||.|||:.:.::|.|....||.:|.:.|:..|:  :.
 Frog   198 LALCFILRRNVVYFILETYIPSALLVVLSWVSFWISMSSVPARTCFGVTTVLAMTTIMMGSRFNF 262

  Fly   299 PPV-AYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISN-MEKGQ--CA 359
            |.. ..:||:|:::..|...||.||.|:..     ..|..::|  ..|...:|.| :|:.:  .:
 Frog   263 PTANCIIKAIDVYLGICFSFVFGALLEYAF-----AHYCSELN--SAVNKEKIKNSLEEPEHDIS 320

  Fly   360 TVASWEGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMW------ 418
            :|.........:||..||...|.:.||           :.|::...|...     ||:.      
 Frog   321 SVLIACDSKQLNRKENQTENAPEKNSL-----------KNSVIFKLWLKI-----KIIRLKKFNV 369

  Fly   419 ---REIDKVSRAVFPILFFVFVLLYWPILLM 446
               ..:|:.||.|||::|.:..::||...|:
 Frog   370 TNPENVDRYSRTVFPLIFLIINIIYWTYYLL 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 114/414 (28%)
gabrpXP_017948119.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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