DRSC/TRiP Functional Genomics Resources

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Protein Alignment alka and glra2

DIOPT Version :10

Sequence 1:NP_610619.2 Gene:alka / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_004912302.1 Gene:glra2 / 100494348 XenbaseID:XB-GENE-958032 Length:488 Species:Xenopus tropicalis


Alignment Length:458 Identity:146/458 - (31%)
Similarity:217/458 - (47%) Gaps:99/458 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL---EIPDDIFEEGD 105
            |...|| |:.||.||.|..:||:....||....||:||::|:.|.|.:.||   |.|||..:   
 Frog    56 YDARIR-PNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLSYSEYPDDSLD--- 116

  Fly   106 DYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLY 170
                |.|.:.::.|:||.:|.|.|.|....:|.....:.::||..|.|:.|:...::|.|:.:.:
 Frog   117 ----LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNF 177

  Fly   171 PMDIQVCPIYIESFSSNNQKVKLRW-SDSGVTLNPELKLLQYNLGQPLELEESDGYMPE--KVGN 232
            |||:|.|.:.:|||......:...| |.|.|.:...|.|.|:.|.:..||    ||..:  ..|.
 Frog   178 PMDVQTCAMQLESFGYTMNDLIFEWLSTSPVQVADGLTLPQFILKEENEL----GYCTKHYNTGK 238

  Fly   233 FSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG-- 295
            |:.:.|.|..|||:|::|||.:.||.|:|:|||.|||:.:||.|.||.|.:|.:||:.|..:|  
 Frog   239 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSR 303

  Fly   296 ADIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQ--------------------YQVN 340
            |.:|.|:||||:|:|||.|:|.|||||.|:..|..:..|::                    ..|.
 Frog   304 ASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQSKTVLVGNESVE 368

  Fly   341 RIPKVLPMR------------------------------ISNMEKGQCATVASWEGGAVRSRKAT 375
            .:.::..:|                              .|....|.|..|.  :|.||::    
 Frog   369 SVRRMNGLRSTDSSAYGTLNQIYNPSLREEDVARESRFNFSGYGMGHCLQVK--DGTAVKA---- 427

  Fly   376 QTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWR--EIDKVSRAVFPILFFVFVL 438
             ||..|         .||:|           .|.|:..:|.:.|  .||.:|||.||:.|.:|.:
 Frog   428 -TPPIP---------PPPQP-----------KDADSIKKKFVDRAKRIDTISRAAFPLAFLIFNI 471

  Fly   439 LYW 441
            .||
 Frog   472 FYW 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alkaNP_610619.2 LIC 8..441 CDD:455710 144/456 (32%)
glra2XP_004912302.1 LIC 44..477 CDD:273305 146/458 (32%)

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