Sequence 1: | NP_001286298.1 | Gene: | CG12344 / 36145 | FlyBaseID: | FBgn0033558 | Length: | 449 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004911866.1 | Gene: | gabra5 / 100494208 | XenbaseID: | XB-GENE-980292 | Length: | 475 | Species: | Xenopus tropicalis |
Alignment Length: | 476 | Identity: | 126/476 - (26%) |
---|---|---|---|
Similarity: | 209/476 - (43%) | Gaps: | 90/476 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 FILMWLSEATEAHMNY-TAKP-------------RVV--LPPNYVKEIRPP-SKKGSPVIVDFSI 64
Fly 65 FVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSK 129
Fly 130 IAEIATLTHKFTS----VTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQK 190
Fly 191 VKLRWSD----SGVTLNPELKLLQYNL-GQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHL 250
Fly 251 IQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DIPPVAYVKALDLWMAG 313
Fly 314 CMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVASWEG----GAVRSRKA 374
Fly 375 TQTPTTPGQTSLQGNGG--PPKPARRQSLLS----------VAWTDTDTGVEKIMWR---EIDKV 424
Fly 425 SRAVFPILFFVFVLLYWPILL 445 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12344 | NP_001286298.1 | LIC | 8..441 | CDD:273305 | 123/470 (26%) |
gabra5 | XP_004911866.1 | LIC | 25..452 | CDD:273305 | 124/469 (26%) |
LGIC_ECD_GABAAR_A5 | 62..260 | CDD:349839 | 50/212 (24%) | ||
Cys-loop | 177..191 | CDD:349839 | 5/13 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |