DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and XB5799637

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_031762346.1 Gene:XB5799637 / 100490720 XenbaseID:XB-GENE-5799638 Length:409 Species:Xenopus tropicalis


Alignment Length:437 Identity:130/437 - (29%)
Similarity:213/437 - (48%) Gaps:53/437 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MNYTAKPRVVLPP-------NYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQ 87
            :|...|...:|||       .|.|.:||....| ||.|..|:.:..|::|:..:||:...:|:.|
 Frog     3 VNAEGKEGEILPPTIQKLMKGYNKYLRPFFDNG-PVTVGMSLDIASIDTISEINMDYTATIFLRQ 66

  Fly    88 RWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVR 152
            ||.:.||     .||.... ::|...:.|..|.||.:.::||.:.:..:|.:...:.:|.|.||.
 Frog    67 RWTDERL-----CFESNKS-LSLDGRLVELLWVPDTFIVDSKKSFLHDMTVENRLIRIYPNGTVL 125

  Fly   153 YAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRW---SDSGVTLNPELKLLQYNLG 214
            ||.|:...:||.|:...||||.|.|.:.:||:|.|...|...|   :||...|: .|:|.||   
 Frog   126 YALRITTTVACSMDLTKYPMDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGLD-ALRLAQY--- 186

  Fly   215 QPLELEESDGYMPEKV---GNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIP 276
               .:|:....:.|.|   |.:.:|..:|..:|.|.:.:::|:.||.|:|:|||.|||:.|.::|
 Frog   187 ---AVEDHYTSVSEAVYETGRYPKLVFHFDLKRNILYFILETYVPSILLVVLSWVSFWISLSSVP 248

  Fly   277 GRVTLLVTCMLTLVTMFTGA--DIPPV-AYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQ 338
            .|:.:.||.:||:.|:..||  .:|.. .::||:|:::..|...:|.||.|:.:.....:...:|
 Frog   249 ARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAIAHFYTLHQPHQ 313

  Fly   339 VNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRKATQTPTTPGQTSLQGNG-----GPPKPARR 398
            .|...|.|   ::..|.....|::     ||...::.|| ..|.:.   |||     .|..|..:
 Frog   314 KNSTIKKL---VAEDEADMNGTIS-----AVSDGQSHQT-EPPDEI---GNGKKKIKSPVDPVLK 366

  Fly   399 QSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPILL 445
            : ||.|.:.     .:.....:||..||..||:.|.:..:.||...|
 Frog   367 R-LLCVFYC-----FQVQNPHDIDNYSRISFPLSFMIINVFYWAYYL 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 127/431 (29%)
XB5799637XP_031762346.1 LIC 2..406 CDD:273305 129/434 (30%)
LGIC_ECD_GABAAR_pi 36..217 CDD:349805 59/193 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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