Protein Alignment alka and gabrb1

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_012811146.2
• Gene: gabrb1 / 100489344
• XenbaseID: XB-GENE-6049110
• Length: 477
• Species: Xenopus tropicalis
• Alignment Length: 460
• Identity: 132/460 - (28%)
• Similarity: 213/460 - (46%)
• Gaps: 77/460 - (16%)

  Fly    41 PPN--YVKE----------IR-PPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLES 92
            |.|  ||||          || .|...|..|.|...|.|..|:.::..:||:.:.|:..|.|.:.
 Frog    31 PSNMSYVKETVDRLLKGYDIRLRPDFGGPSVEVGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDK 95

  Fly    93 RLE---IPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYA 154
            ||.   ||.::        ||...|.:..|.||.||||.|.:.:..:|.|...:.|:.:.||.|.
 Frog    96 RLSYSGIPLNL--------TLDNRVADQLWVPDTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYG 152

  Fly   155 ARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWS--DSGVTLNPELKLLQYNLGQPL 217
            .|:....||.|:.:.||:|.|.|.:.|||:......:|..|:  |..:|...:::|.|:::   :
 Frog   153 LRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWNGGDKAITGVEKIELPQFSI---I 214

  Fly   218 ELEESDGYMPEKVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLL 282
            :.:.....:....|.:.||::.||.:|.||:.::||:.||:|:.:|||.|||:..||...||.|.
 Frog   215 DYKMVSRNVIFSTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALG 279

  Fly   283 VTCMLTLVTMFT--GADIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVL-------------- 331
            :|.:||:.|:.|  ...:|.:.||||:|:::.||.:.||.||.|:..|..:
 Frog   280 ITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQLQKKAAE 344

  Fly   332 ---------------DVQYQYQVNRIPKVLPMR--ISNME-----KGQCATVASWEGGAVRSRKA 374
                           .||.....|.:...|.:|  :|..|     ....||:.|::..:::.||.
 Frog   345 KAEKANNEKTKLEMNKVQVDAHGNILLTTLELRNEVSGSEVLTSISDPRATMFSYDSASIQYRKP 409

  Fly   375 TQTPTTPGQTSLQGNGGPPKP--ARRQSLLSVAWTD-TDTGVEKIMWREIDKVSRAVFPILFFVF 436
            ........:::|..:....|.  .||.|.:.:...| ||.       ..||:.||.:||:.|..|
 Frog   410 VANRDMYSRSTLDRHVVHKKGRLRRRASQIKIKIPDLTDV-------NGIDRWSRMIFPVAFAFF 467

  Fly   437 VLLYW 441
            .::||
 Frog   468 NVVYW 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	130/458 (28%)
gabrb1	XP_012811146.2	LIC	9..475	CDD:273305	132/460 (29%)