DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and glra3

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_002933371.1 Gene:glra3 / 100488938 XenbaseID:XB-GENE-1011160 Length:449 Species:Xenopus tropicalis


Alignment Length:435 Identity:133/435 - (30%)
Similarity:226/435 - (51%) Gaps:42/435 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ATEAHMNYTAKPRVVLPPNYVKEIR----------PPSKKGSPVIVDFSIFVVDINSINVEDMDF 79
            ||:...:..::|..:.|.:::.::.          .|:.||.||.|..:|||....||....||:
 Frog    27 ATKETDSARSRPSPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFVNSFGSIAETTMDY 91

  Fly    80 RVDMFIHQRWLESRL---EIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFT 141
            |:::|:.|:|.:.||   |.|||..:       |.|.:.::.|:||.:|.|.|.|....:|....
 Frog    92 RLNIFLRQKWNDPRLAYSEYPDDSLD-------LDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 149

  Fly   142 SVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDSG-VTLNPE 205
            .:.::|:..|.|:.|:...::|.|:.:.:|||:|.|.:.:|||......:...|.::| |.:...
 Frog   150 LLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQIADG 214

  Fly   206 LKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWL 270
            |.|.|:.|.:..:|.....:.  ..|.|:.:.|.|..|||:|::|||.:.||.|:|:|||.|||:
 Frog   215 LTLPQFVLKEEKDLRYCTKHY--NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWI 277

  Fly   271 GLDAIPGRVTLLVTCMLTLVTMFTG--ADIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDV 333
            .:||.|.||.|.:|.:||:.|..:|  |.:|.|:||||:|:|||.|:|.||:||.|:..|..:..
 Frog   278 NMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342

  Fly   334 QYQYQVNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARR 398
            |::..:....|....|..::.:.:.:..|...|..::::... .|..|       ...||.|...
 Frog   343 QHKELLRFRRKRKKDRDDDVRESRFSFTAYGMGPCLQAKDGV-NPKGP-------LNAPPAPKTH 399

  Fly   399 QSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPI 443
            :.:..|.       :::.  ::||.:|||.||:.|.:|.:.||.|
 Frog   400 EEMRKVF-------IDRA--KKIDTLSRACFPLAFLIFNIFYWVI 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 130/431 (30%)
glra3XP_002933371.1 LIC 12..436 CDD:273305 133/435 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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