Protein Alignment alka and gabrb1

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_002664179.2
• Gene: gabrb1 / 100331377
• ZFINID: ZDB-GENE-090313-230
• Length: 484
• Species: Danio rerio
• Alignment Length: 494
• Identity: 139/494 - (28%)
• Similarity: 228/494 - (46%)
• Gaps: 101/494 - (20%)

  Fly    15 LGFILMWLSEATEAHMNYTAKPRVVLPPN--YVK----------EIR-PPSKKGSPVIVDFSIFV 66
            |..:.:.|..:..||       .|..|.|  |||          :|| .|...|.||.|..||.:
Zfish    20 LVLVALTLGRSPPAH-------SVNEPSNMSYVKVTVDKLLKGYDIRLRPDFGGPPVDVGMSIDI 77

  Fly    67 VDINSINVEDMDFRVDMFIHQRWLESRLE---IPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNS 128
            ..|:.::..:||:.:.|:..|.|.:.||.   ||.::        ||...|.:..|.||.||:|.
Zfish    78 SSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNL--------TLDNRVADQLWVPDTYFIND 134

  Fly   129 KIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKL 193
            |.:.:..:|.|...:.|:.:.||.|..|:....||.|:.:.||:|.|.|.:.|||:......::.
Zfish   135 KKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEF 199

  Fly   194 RW-SDSGVTLNPELKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHLIQTFAPS 257
            .| ..|.||....::|.|:::   ::.:.....:....|::.||::.|:.:|.||:.::||:.||
Zfish   200 YWQGGSSVTGVDNIELPQFSI---IDYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPS 261

  Fly   258 SLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFT--GADIPPVAYVKALDLWMAGCMLSVFA 320
            :|:.:|||.|||:..||...||.|.:|.:||:.|:.|  ...:|.:.||||:|:::.||.:.||.
Zfish   262 TLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFL 326

  Fly   321 ALAEFVVVKVL--------------------DVQYQYQVNR--------IPKV-LPMRISNMEK- 355
            ||.|:..|..:                    :.:.:.:.|:        ||.. |.:|:|..|.
Zfish   327 ALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEKSRLESNKVQVDVHGSIPLTNLDLRLSGAEML 391

  Fly   356 GQCA----TVASWEGGAVRSRK-------------ATQTPTTPGQTSLQGNGGPPKPARRQSLLS 403
            |...    |:.|::..:::.||             :.:.|..|.::.|:         ||.:.|.
Zfish   392 GALGDPRNTMFSYDSASIQYRKPLTGRDLYGRPTASIERPLAPKKSRLR---------RRAAQLK 447

  Fly   404 VAWTD-TDTGVEKIMWREIDKVSRAVFPILFFVFVLLYW 441
            |...| ||...       |||.||.:|||.:..|.|:||
Zfish   448 VKIPDLTDVNA-------IDKWSRVIFPITYTFFNLVYW 479

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	137/492 (28%)
gabrb1	XP_002664179.2	LIC	19..482	CDD:273305	139/494 (28%)