Sequence 1: | NP_001286298.1 | Gene: | CG12344 / 36145 | FlyBaseID: | FBgn0033558 | Length: | 449 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002933509.2 | Gene: | gabra2 / 100170583 | XenbaseID: | XB-GENE-1000398 | Length: | 451 | Species: | Xenopus tropicalis |
Alignment Length: | 461 | Identity: | 126/461 - (27%) |
---|---|---|---|
Similarity: | 206/461 - (44%) | Gaps: | 73/461 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 ILMWLSEA--------TEAHMNYTAKPRVV--LPPNYVKEIRPPSKKGSPVI-VDFSIFVVDINS 71
Fly 72 INVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFEN-FWQPDPYFLNSK--IAEI 133
Fly 134 ATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRW--- 195
Fly 196 SDSGVTLNPE-LKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHLIQTFAPSSL 259
Fly 260 VVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DIPPVAYVKALDLWMAGCMLSVFAAL 322
Fly 323 AEFVVV-------------KVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRKA 374
Fly 375 TQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLL 439
Fly 440 YWPILL 445 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12344 | NP_001286298.1 | LIC | 8..441 | CDD:273305 | 123/455 (27%) |
gabra2 | XP_002933509.2 | LIC | 12..437 | CDD:273305 | 125/458 (27%) |
LGIC_ECD_GABAAR_A2 | 48..250 | CDD:349836 | 54/214 (25%) | ||
Cys-loop | 167..181 | CDD:349836 | 5/13 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |