Protein Alignment alka and gabrb3

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001096164.1
• Gene: gabrb3 / 100124708
• XenbaseID: XB-GENE-6030743
• Length: 475
• Species: Xenopus tropicalis
• Alignment Length: 460
• Identity: 137/460 - (29%)
• Similarity: 217/460 - (47%)
• Gaps: 85/460 - (18%)

  Fly    43 NYVKE----------IR-PPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLE- 95
            ::|||          || .|...||||.|..:|.:..|:.::..:||:.:.|:..|.|.:.||.
 Frog    35 SFVKETVDKLLKGYDIRLRPDFGGSPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99

  Fly    96 --IPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMH 158
              ||.::        ||...|.:..|.||.||||.|.:.:..:|.|...:.|:.:.||.|..|:.
 Frog   100 TGIPLNL--------TLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156

  Fly   159 AIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRW--SDSGVTLNPELKLLQYNLGQPLELEE 221
            ...||.|:.:.||:|.|.|.:.|||:......::..|  .|:.||....::|.|:::
 Frog   157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGDNAVTGVERIELPQFSI-------- 213

  Fly   222 SDGYMPEK-----VGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTL 281
            .|..:..|     .|::.||::.|:.:|.||:.::||:.||.|:.:|||.|||:..||...||.|
 Frog   214 MDHKLVSKNVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 278

  Fly   282 LVTCMLTLVTMFT--GADIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVL----DVQYQ---- 336
            .:|.:||:.|:.|  ...:|.:.||||:|:::.||.:.||.||.|:..|..:    ..|.|
 Frog   279 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQMQKKLA 343

  Fly   337 ------------YQVNRIPK-----VLPMRISNMEKGQCATVA---------SWEGGAVRSRKAT 375
                        ::.||:..     :..:.|.|...|...|.:         |::...::.||.:
 Frog   344 EKSAKSNKDHSKFESNRVDAHGNILLTTLEIHNEVTGNEITTSVSDARNSATSFDNSGIQYRKQS 408

  Fly   376 QTPTTPGQTSLQGNGGPPKPA---RRQSLLSVAWTD-TDTGVEKIMWREIDKVSRAVFPILFFVF 436
            ....:.|:.:...| .|||..   ||.|.|.:...| ||...       ||:.||.||||.|.:|
 Frog   409 TARDSLGRRTADRN-HPPKKTHLRRRSSQLKIKIPDLTDVNA-------IDRWSRIVFPITFSLF 465

  Fly   437 VLLYW 441
            .|:||
 Frog   466 NLIYW 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	135/458 (29%)
gabrb3	NP_001096164.1	LIC	11..473	CDD:273305	137/460 (30%)