DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12325 and CG10931

DIOPT Version :10

Sequence 1:NP_610618.1 Gene:CG12325 / 36144 FlyBaseID:FBgn0033557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster


Alignment Length:321 Identity:83/321 - (25%)
Similarity:140/321 - (43%) Gaps:49/321 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 SEQYIMKQQ--GHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFS 444
            |..|.:|..  |||..:|.:.:||:|:.:.:...|..:|||:..::.|..:.:.|..||..:.:|
  Fly    43 SPGYAIKHSLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWS 107

  Fly   445 RNKKFLVSSSLDGTVRAFDVNRYRNFRTFTSPNPAQFSCVAVDYSGELVVAGGQDVFD--IFLWS 507
            . ...:.|.|.|.|||.:|.......:.....:...|||.....:..|....    ||  :.||.
  Fly   108 A-AGLIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTS----FDETVRLWD 167

  Fly   508 VKTGKLLEIISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTN-- 570
            |:|||.|:|:..|:.|:.|:.|.  ...:..|:.|:|..|::|   :|::.| .:..:.||.|  
  Fly   168 VRTGKTLKIVHAHQDPITSVDFH--RDGNIFVTSSYDGLVRLW---DSSTGH-VLKTLVDVDNIP 226

  Fly   571 ---VTFSPSGEEIAVATLSGNITIFDIKSAGQVTTIEGR-NDLSAGRLETDIITARKNAQANYFS 631
               |.|||:|..|..:||:..:.:::.|....:.|..|. |:.                   |.|
  Fly   227 VGYVKFSPNGRYILSSTLNNTLRLWNYKKPKCMRTYRGHLNEF-------------------YCS 272

  Fly   632 TIEYSADGECILAAGKSAN-ICIYHVREAILLKKFEITQNHSLDGLNDFISRKHLSEFGNM 691
            ...:|..|...:.:|...| :||::      |:..|:.|..|.:|  |.|...|.....|:
  Fly   273 NSNFSTTGGIWIVSGSEDNTLCIWN------LQTRELVQKISTEG--DQILSTHCHPTANV 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12325NP_610618.1 WD40 <20..424 CDD:441893 14/43 (33%)
WD40 repeat 59..94 CDD:293791
WD40 repeat 99..143 CDD:293791
WD40 repeat 149..187 CDD:293791
WD40 repeat 192..247 CDD:293791
WD40 306..657 CDD:441893 74/285 (26%)
WD40 repeat 353..391 CDD:293791 3/10 (30%)
WD40 repeat 397..433 CDD:293791 9/35 (26%)
WD40 repeat 438..474 CDD:293791 9/35 (26%)
WD40 repeat 482..518 CDD:293791 13/37 (35%)
WD40 repeat 524..557 CDD:293791 8/32 (25%)
WD40 repeat 565..594 CDD:293791 11/33 (33%)
Utp12 793..895 CDD:461125
CG10931NP_611261.1 WD40 <47..340 CDD:441893 81/317 (26%)
WD40 repeat 59..96 CDD:293791 9/36 (25%)
WD40 repeat 102..137 CDD:293791 8/35 (23%)
WD40 repeat 142..178 CDD:293791 14/39 (36%)
WD40 repeat 185..220 CDD:293791 9/40 (23%)
WD40 repeat 227..263 CDD:293791 10/35 (29%)
WD40 repeat 271..309 CDD:293791 10/43 (23%)
WD40 repeat 314..340 CDD:293791 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.