DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12325 and pwp2

DIOPT Version :10

Sequence 1:NP_610618.1 Gene:CG12325 / 36144 FlyBaseID:FBgn0033557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_031751571.1 Gene:pwp2 / 100158563 XenbaseID:XB-GENE-6257709 Length:893 Species:Xenopus tropicalis


Alignment Length:949 Identity:430/949 - (45%)
Similarity:608/949 - (64%) Gaps:63/949 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFSYKFSNLLGTIYRNGNLVFTPDGNSVISPVGNRITVYDLKNNKSRTLSLESRYNYTNIALSP 65
            ||:||||||||||.||.|||.|||||||:|||||||::::.||||...||.|.:|.|.|.:||||
 Frog     1 MKYSYKFSNLLGTFYRRGNLSFTPDGNSLISPVGNRLSIFHLKNNNGETLPLATRCNITCVALSP 65

  Fly    66 DGSLLIAVNEKGEAQLISMMSCTVIHRHKFQTGVQCICFSPNGAFFAVAVQNVVLIFCAPGEITG 130
            ||||.|.|:|:|.|.|||..:.:|:::..||..||.:.|||:|..|.:...||.:::.|||: ..
 Frog    66 DGSLGILVDEEGAALLISFATKSVLNQFSFQQPVQSVSFSPDGRKFLLTKGNVAMLYHAPGK-RR 129

  Fly   131 EYNPFVLRRRFLGGFDDVTWLDWSSDSRLLAIGCRDSSTKIVAINYTKNFRTYNLSGHTDAIVAC 195
            |:|.|||.:.|.|.:|:.|.:||:.||:..|:|.:|.||.:......:|...|:|.||.||||||
 Frog   130 EFNAFVLDKTFYGPYDETTCIDWTDDSKCFAVGSKDMSTWVFGAERWQNLIYYSLGGHKDAIVAC 194

  Fly   196 FFEANSLHLNTISRNGQLCLWECSLAPSDLEDAERPKIAPPQRKKEKKAVSDNESEDDVENVVEK 260
            ||:..||.|.|||.:..||:|.|        |.|..::.|  |..:|||.....:|:.....:..
 Frog   195 FFQEGSLDLYTISADATLCVWGC--------DTELAQLLP--RDPDKKARESGGAEEPRAEEIRG 249

  Fly   261 DALKEESTKEAEDVNHIKNEDETKSHPFFYKKITRHYLADEPRKEQRDVQLTAANYNTRTKVLVV 325
            .|    :....|.|..::           |:|.:||:.    .||.....||||.::.:..:||.
 Frog   250 TA----NPAPEESVGRVR-----------YRKSSRHFF----NKEGDFTALTAAAFHKKLNILVT 295

  Fly   326 AFSSGAFYLYELPDVNMIHSLSISDYPISAALFNCTGDWVALASREIGQLLVWEWQSEQYIMKQQ 390
            .||||.|:::|||::::||||||||..:|....||||||:|.....:|||||||||||.|::|||
 Frog   296 GFSSGMFHIHELPELSLIHSLSISDQRVSTISINCTGDWIAFGCSGLGQLLVWEWQSESYVLKQQ 360

  Fly   391 GHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRNKKFLVSSSL 455
            ||.:.|..::||.|||.|.|||:|.|||:|:|.|.||||||::|||.||.:.|:.:.:.::|:||
 Frog   361 GHFNNMGALSYSPDGQHIVTGGDDGKVKVWDTSSGFCFVTFTDHTSSVTAVTFASSGQVILSASL 425

  Fly   456 DGTVRAFDVNRYRNFRTFTSPNPAQFSCVAVDYSGELVVAGGQDVFDIFLWSVKTGKLLEIISGH 520
            |||||||.:.|||||||||||.||||||:|||.|||:|.||.||.:::::||::||:||:::|||
 Frog   426 DGTVRAFSLLRYRNFRTFTSPKPAQFSCLAVDGSGEIVCAGAQDSYEVYVWSMQTGRLLDVLSGH 490

  Fly   521 EGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATL 585
            |||:..:||:|  ..|.|.:.||||||::|:.::|....||::..||...|||.|.|.|||||::
 Frog   491 EGPISCVAFNP--WRSVLATASWDKTVRLWDMVDSWRTTETLNLTSDALAVTFRPDGREIAVASM 553

  Fly   586 SGNITIFDIKSAGQVTTIEGRNDLSAGRLETDIITARKNAQANYFSTIEYSADGECILAAGKSAN 650
            .|.||.::.:...|..:||||:||..||.|.|.:||:.:::...|:.:.|:|||:.:||.|.|..
 Frog   554 DGQITFWESEKGTQTGSIEGRHDLKLGRKELDKVTAKHSSKGKAFTALCYTADGQALLAGGASRY 618

  Fly   651 ICIYHVREAILLKKFEITQNHSLDGLNDFISRKHLSEFGNMALVEEREELEGGRVAIRLPGVQRG 715
            :|:|||.|.||.|||||:.|||||.:.:|:.|:.::|||::||::|....||| |::.||||.||
 Frog   619 VCLYHVGEQILAKKFEISCNHSLDAMEEFLDRRKMTEFGSVALIDEGTGEEGG-VSLSLPGVHRG 682

  Fly   716 DMSSRRFQQEVRVFSVKFSPTGQAFAAAGTEGLCIYALDKGVVFDPFDLSLEVTPKAVHESLKQQ 780
            |||||.|:.|:||.|:.|||||:::||..||||.|::||...|||||||..|||...|..:|:..
 Frog   683 DMSSRHFKPEIRVSSLHFSPTGRSWAATSTEGLLIFSLDSSAVFDPFDLDEEVTAGGVRRALRGA 747

  Fly   781 NYTKALVMSLKLNEPNLIALVLERVPYKDVELVCADLSPEFAQRLLQQLARQLQSTPHIEFYLQW 845
            .:|:|:||:::|||.:|:...||.||..|:.::|:.|...:.||||..||.|::.:.|::|||.|
 Frog   748 EWTRAIVMAMRLNEESLLREALESVPCADIAVLCSSLPELYVQRLLVFLATQIERSRHLQFYLMW 812

  Fly   846 SCCLLTKHGNQDGVFQHTGLLALHEV---LSRKYEMLNKICDYNKYTLKVLLDRADKLEQKNEGK 907
            :..||..||:.......:.|.|:|.:   |......::|:|::|:|.:|..|     ...:..|.
 Frog   813 AHQLLLLHGHSMKSRSVSVLPAVHSLQKSLQGHLSEISKLCEWNRYNMKFAL-----CLSRQRGM 872

  Fly   908 PNATEEDSDEEMLLIRSKDDENGQAQFSDEEESDSGSEE 946
            ....||                      .|.||.|||.|
 Frog   873 KRGAEE----------------------SEAESVSGSLE 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12325NP_610618.1 WD40 <20..424 CDD:441893 177/403 (44%)
WD40 repeat 59..94 CDD:293791 18/34 (53%)
WD40 repeat 99..143 CDD:293791 18/43 (42%)
WD40 repeat 149..187 CDD:293791 13/37 (35%)
WD40 repeat 192..247 CDD:293791 23/54 (43%)
WD40 306..657 CDD:441893 181/350 (52%)
WD40 repeat 353..391 CDD:293791 22/37 (59%)
WD40 repeat 397..433 CDD:293791 22/35 (63%)
WD40 repeat 438..474 CDD:293791 20/35 (57%)
WD40 repeat 482..518 CDD:293791 19/35 (54%)
WD40 repeat 524..557 CDD:293791 13/32 (41%)
WD40 repeat 565..594 CDD:293791 15/28 (54%)
Utp12 793..895 CDD:461125 35/104 (34%)
pwp2XP_031751571.1 WD40 10..394 CDD:441893 185/413 (45%)
WD40 repeat 19..52 CDD:293791 22/32 (69%)
WD40 repeat 59..94 CDD:293791 18/34 (53%)
WD40 repeat 99..136 CDD:293791 15/37 (41%)
WD40 repeat 148..186 CDD:293791 13/37 (35%)
WD40 repeat 191..272 CDD:293791 31/105 (30%)
WD40 275..634 CDD:441893 188/360 (52%)
WD40 repeat 281..318 CDD:293791 18/36 (50%)
WD40 repeat 323..361 CDD:293791 22/37 (59%)
WD40 repeat 367..403 CDD:293791 22/35 (63%)
WD40 repeat 408..444 CDD:293791 20/35 (57%)
WD40 repeat 452..488 CDD:293791 19/35 (54%)
WD40 repeat 494..531 CDD:293791 15/38 (39%)
WD40 repeat 536..575 CDD:293791 17/38 (45%)
Utp12 760..864 CDD:461125 35/103 (34%)

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