DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12343 and syf2

DIOPT Version :9

Sequence 1:NP_610617.1 Gene:CG12343 / 36143 FlyBaseID:FBgn0033556 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_596100.1 Gene:syf2 / 2540611 PomBaseID:SPBC3E7.13c Length:229 Species:Schizosaccharomyces pombe


Alignment Length:229 Identity:78/229 - (34%)
Similarity:128/229 - (55%) Gaps:23/229 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RKARLLDLHKKRQEARTDNHQ---EVVAEDARKK----LPKNWEARKRQAEWILADDKARAEAQA 71
            |:||:..|.|.|::.|..:|:   |||.|.:|.:    |.:..|.::.:||    ::.|:.|.:.
pombe     8 REARVEKLKKIREQMRKSSHENRKEVVQEHSRMRIDPALERRLERKRMEAE----EELAKIETEE 68

  Fly    72 AGKDYERLK----LLEVSAVDADRIEKKKKRKDNPDLGFSTYEAQTARQYNRLVKSMPARDLEKY 132
            .|.|:||.:    .:|.|.....|:.|||:...|  :.||.|.:|.::.|||.::.:.. |.|||
pombe    69 EGGDFERRRAWDWTIEESEKWDQRLRKKKQTIQN--VAFSDYHSQASKDYNRGIRDLKP-DYEKY 130

  Fly   133 ERQKEE-----LGDAFYGGAHTTLHSRTKDTPGAINKMVTDLEQQIERRKKYSRRRIYNDDADVD 192
            ::.|:|     ...|.|..|........|.....:.::|..:::|.:||.|.::||..:::..:.
pombe   131 DKDKKEEKSKSRSVALYDEAERLDWVSNKPDKEHVERLVESIKKQDQRRLKNTKRRGTDEEDHIT 195

  Fly   193 FINERNSKFNKKLDRFYSEHTAEIKQNLERGTAI 226
            ||||||.|||.||.||||::|.:||::||||||:
pombe   196 FINERNRKFNLKLQRFYSKYTKDIKEDLERGTAL 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12343NP_610617.1 SYF2 71..221 CDD:285444 53/158 (34%)
syf2NP_596100.1 SYF2 68..224 CDD:285444 53/158 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 88 1.000 Domainoid score I2126
eggNOG 1 0.900 - - E1_KOG2609
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5993
Inparanoid 1 1.050 119 1.000 Inparanoid score I1503
OMA 1 1.010 - - QHG55400
OrthoFinder 1 1.000 - - FOG0004947
OrthoInspector 1 1.000 - - oto100958
orthoMCL 1 0.900 - - OOG6_103856
Panther 1 1.100 - - LDO PTHR13264
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1436
SonicParanoid 1 1.000 - - X3486
TreeFam 1 0.960 - -
1413.860

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