DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12343 and syf-2

DIOPT Version :9

Sequence 1:NP_610617.1 Gene:CG12343 / 36143 FlyBaseID:FBgn0033556 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001379563.1 Gene:syf-2 / 176003 WormBaseID:WBGene00019402 Length:234 Species:Caenorhabditis elegans


Alignment Length:222 Identity:101/222 - (45%)
Similarity:154/222 - (69%) Gaps:2/222 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TAAEKLAERKARLLDLHKKRQEARTDNHQEVVAEDARKKLPKNWEARKRQAEWILADDKARAEAQ 70
            ::..|:.:...|..||||.||.||.:||::||.||.|.|||||.||:|.:.:|.:.:.:.|..|:
 Worm    14 SSGSKMKDFNQRFRDLHKLRQRARKENHEQVVEEDRRSKLPKNHEAKKERDQWQVKELQDRKAAE 78

  Fly    71 AAGKDYERLKLLEVSAVDADRIEKKKKRKDNPDLGFSTYEAQTARQYNRLVKSMPARDLEKYERQ 135
            ..|.||||::.||:||...:::|:|:|||.|||.||::||..|.||:.||..::.. ||:.|::.
 Worm    79 DKGLDYERVRSLEMSADVTEKLEQKRKRKKNPDQGFTSYEDMTLRQHTRLTAALDP-DLDSYKKM 142

  Fly   136 KEEL-GDAFYGGAHTTLHSRTKDTPGAINKMVTDLEQQIERRKKYSRRRIYNDDADVDFINERNS 199
            :|.: |:.||..|.|.:|.....|..|::|:..|:..|::||::|.|||:|:.||.:|:|||:|.
 Worm   143 RECVGGEQFYPTADTLIHGNHYPTTAAMDKLTKDVHGQVKRREQYHRRRLYDPDAPIDYINEKNK 207

  Fly   200 KFNKKLDRFYSEHTAEIKQNLERGTAI 226
            |||||||::|.::|.:||.:|||||||
 Worm   208 KFNKKLDKYYGKYTEDIKDDLERGTAI 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12343NP_610617.1 SYF2 71..221 CDD:285444 66/150 (44%)
syf-2NP_001379563.1 SYF2 79..229 CDD:400506 66/150 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158768
Domainoid 1 1.000 144 1.000 Domainoid score I2862
eggNOG 1 0.900 - - E1_KOG2609
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5993
Inparanoid 1 1.050 208 1.000 Inparanoid score I2396
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55400
OrthoDB 1 1.010 - - D1565402at2759
OrthoFinder 1 1.000 - - FOG0004947
OrthoInspector 1 1.000 - - oto18704
orthoMCL 1 0.900 - - OOG6_103856
Panther 1 1.100 - - LDO PTHR13264
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1436
SonicParanoid 1 1.000 - - X3486
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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