DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12343 and syf-2

DIOPT Version :10

Sequence 1:NP_610617.1 Gene:CG12343 / 36143 FlyBaseID:FBgn0033556 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001379563.1 Gene:syf-2 / 176003 WormBaseID:WBGene00019402 Length:234 Species:Caenorhabditis elegans


Alignment Length:146 Identity:29/146 - (19%)
Similarity:49/146 - (33%) Gaps:56/146 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 FSNVSQSKAGREVFCNQQTGLLRRLLPFVHHEGSIVRRGGAVGLLKNVC------------FD-- 211
            ||.||        .|.|.:.....|...:...|::|.. ....::.||.            |.  
 Worm    69 FSGVS--------LCRQMSSKPEELCSKIDAFGNVVEE-SVEAIVTNVATIDECTAITESVFSPE 124

  Fly   212 -------SSVHE-----WLLSEEMDVLPFVLLPLAGPEELDDETNEKLPVDLQYLGPDKRREDDP 264
                   :.:||     |.:|  :.:..|::..|..|..:   ..:.|.::||            
 Worm   125 GFVQYVINGIHELTGFNWWMS--IVLTAFLVTVLMSPVSM---RVQNLALELQ------------ 172

  Fly   265 DVRKMLVESLAQLCAT 280
             :|:.|   ||.||:|
 Worm   173 -IRRRL---LALLCST 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12343NP_610617.1 SYF2 71..221 CDD:462400 15/85 (18%)
syf-2NP_001379563.1 SYF2 79..229 CDD:462400 23/128 (18%)

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