DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS15Ab and dhx8

DIOPT Version :9

Sequence 1:NP_610616.1 Gene:RpS15Ab / 36142 FlyBaseID:FBgn0033555 Length:130 Species:Drosophila melanogaster
Sequence 2:XP_002932570.2 Gene:dhx8 / 733563 XenbaseID:XB-GENE-6087171 Length:1181 Species:Xenopus tropicalis


Alignment Length:23 Identity:8/23 - (34%)
Similarity:11/23 - (47%) Gaps:6/23 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 INDIEKW------TNNLLPSRQF 99
            |:|.|||      ..|:|...:|
 Frog   355 ISDPEKWEIKQMIAANVLSKEEF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS15AbNP_610616.1 PTZ00158 1..130 CDD:185487 8/23 (35%)
dhx8XP_002932570.2 Pnp 6..463 CDD:224106 8/23 (35%)
S1_DHX8_helicase 226..304 CDD:240189
HrpA 518..1180 CDD:224557
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165173451
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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