DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS15Ab and Fndc10

DIOPT Version :9

Sequence 1:NP_610616.1 Gene:RpS15Ab / 36142 FlyBaseID:FBgn0033555 Length:130 Species:Drosophila melanogaster
Sequence 2:XP_001058198.1 Gene:Fndc10 / 680656 RGDID:1589420 Length:225 Species:Rattus norvegicus


Alignment Length:32 Identity:10/32 - (31%)
Similarity:14/32 - (43%) Gaps:11/32 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PSRQF-----GYVVLTTSGGIMDHEEARRKHL 121
            |.|.|     |.|.|.::||.:      |.|:
  Rat    58 PVRGFRCQTPGCVTLASAGGSL------RAHV 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS15AbNP_610616.1 PTZ00158 1..130 CDD:185487 10/32 (31%)
Fndc10XP_001058198.1 DUF5579 24..225 CDD:375307 10/32 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2326
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 244 1.000 Inparanoid score I3207
OMA 1 1.010 - - QHG62199
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001025
OrthoInspector 1 1.000 - - mtm9122
orthoMCL 1 0.900 - - OOG6_100322
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X687
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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