Protein Alignment Lsm10 and SMD1

DIOPT Version :10

• Sequence 1: NP_610615.1
• Gene: Lsm10 / 36141
• FlyBaseID: FBgn0033554
• Length: 141
• Species: Drosophila melanogaster
• Sequence 2: NP_011588.3
• Gene: SMD1 / 852964
• SGDID: S000003306
• Length: 146
• Species: Saccharomyces cerevisiae
• Alignment Length: 109
• Identity: 27/109 - (24%)
• Similarity: 39/109 - (35%)
• Gaps: 27/109 - (24%)

  Fly    23 LQGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVF---------IDRN----------GGQHP- 67
            |:...|.|:|.|.|:|.|.:......|...||....         ::.|          |||.|
Yeast    10 LRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLTGGQQPT 74

  Fly    68 -------FDHFMVRNRMIRQIHIPSYLDAEQELRSAMERGVLRR 104
                   ..:..:|...||||.:|..|:.:..|....:...|||
Yeast    75 ASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRR 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm10	NP_610615.1	LSm10	7..84	CDD:212480	21/87 (24%)
SMD1	NP_011588.3	Sm_like	2..111	CDD:469694	24/100 (24%)