Protein Alignment Lsm10 and Snrpd1

DIOPT Version :10

• Sequence 1: NP_610615.1
• Gene: Lsm10 / 36141
• FlyBaseID: FBgn0033554
• Length: 141
• Species: Drosophila melanogaster
• Sequence 2: NP_033252.1
• Gene: Snrpd1 / 20641
• MGIID: 98344
• Length: 119
• Species: Mus musculus
• Alignment Length: 99
• Identity: 26/99 - (26%)
• Similarity: 36/99 - (36%)
• Gaps: 7/99 - (7%)

  Fly    23 LQGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVFIDRNGGQHPFDHFMVRNRMIRQIHIPSYL 87
            |...:|.|:|.|.|.|.|.|...|..|...|.......:|......:...:|...||...:|..|
Mouse    10 LSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSL 74

  Fly    88 -------DAEQELRSAMERGVLRRKRVETKGGKR 114
                   |.|.:::|.....|..|.|...:|..|
Mouse    75 PLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGR 108

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm10	NP_610615.1	LSm10	7..84	CDD:212480	16/60 (27%)
Snrpd1	NP_033252.1	Sufficient for interaction with CLNS1A. /evidence=ECO:0000250	1..80		18/69 (26%)
		Sm_D1	2..93	CDD:212471	21/82 (26%)
		Required for interaction with SMN1. /evidence=ECO:0000250|UniProtKB:P62314	69..119		10/40 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	88..119		6/21 (29%)