DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsm10 and Lsm10

DIOPT Version :10

Sequence 1:NP_610615.1 Gene:Lsm10 / 36141 FlyBaseID:FBgn0033554 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_620046.1 Gene:Lsm10 / 116748 MGIID:2151045 Length:122 Species:Mus musculus


Alignment Length:122 Identity:40/122 - (32%)
Similarity:57/122 - (46%) Gaps:12/122 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SAREKYLVSNTLNCWPVMLQGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVFIDRNGGQHPFD 69
            |.:|:.:..|:|......|||....:||.:|:...|.||..|..|...|.:..:.||.|.|...|
Mouse     6 SVKERTISENSLIILLQGLQGQITTVDLRDESVARGRIDNVDAFMNIRLANVTYTDRWGHQVELD 70

  Fly    70 HFMVRNRMIRQIHIPSYLD----AEQELRSAMERGVLRRKR-VETKG-GKRTFKQKR 120
            ...|..|.:|.:|||..:|    .||:|:      ::.|.| ...|| |:|.|..||
Mouse    71 DLFVTGRNVRYVHIPDGVDITATIEQQLQ------IIHRVRNFGGKGQGRREFPSKR 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsm10NP_610615.1 LSm10 7..84 CDD:212480 24/76 (32%)
Lsm10NP_620046.1 LSm10 8..85 CDD:212480 24/76 (32%)

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