DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12341 and Tmem170b

DIOPT Version :9

Sequence 1:NP_610612.1 Gene:CG12341 / 36137 FlyBaseID:FBgn0033550 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_001008774.2 Gene:Tmem170b / 361230 RGDID:1561506 Length:132 Species:Rattus norvegicus


Alignment Length:105 Identity:47/105 - (44%)
Similarity:75/105 - (71%) Gaps:0/105 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LNTFREMWYHVFLWALFSSIFIHTCAAVVAFFTLRKHKFGRFFSILILVMGFLSPASSGIISSAV 88
            |....||||.:||||||||:|:|..|.|:.|..|::|:.||..||:.:.:|||:..:..:|:||.
  Rat    28 LRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVMLQRHRQGRVLSIIAVSIGFLASVTGAMITSAA 92

  Fly    89 IAFVHRASSLPMSPIYAMIWGLGQTIVSACLGFTRILATL 128
            :|.::|.:...|:|:.|::||:|||:::..:.|:||||||
  Rat    93 VAGIYRVAGKNMAPLEALVWGVGQTVLTLIISFSRILATL 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12341NP_610612.1 Tmemb_170 24..128 CDD:401996 45/103 (44%)
Tmem170bNP_001008774.2 Tmemb_170 28..132 CDD:401996 45/103 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345408
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4349
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48988
OrthoDB 1 1.010 - - D1545489at2759
OrthoFinder 1 1.000 - - FOG0002648
OrthoInspector 1 1.000 - - otm44903
orthoMCL 1 0.900 - - OOG6_106018
Panther 1 1.100 - - O PTHR22779
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2017
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.720

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