Protein Alignment Amfr and APC11

DIOPT Version :9

• Sequence 1: XP_038954087.1
• Gene: Amfr / 361367
• RGDID: 1311551
• Length: 643
• Species: Rattus norvegicus
• Sequence 2: NP_010276.3
• Gene: APC11 / 851554
• SGDID: S000002166
• Length: 165
• Species: Saccharomyces cerevisiae
• Alignment Length: 116
• Identity: 32/116 - (27%)
• Similarity: 45/116 - (38%)
• Gaps: 40/116 - (34%)

  Rat   329 ATAEELAVNNDD---------CAIC---WDSMQAARKLP----------CGHLFHNSCLRSWLEQ 371
            :|::|.|.|||.         |.||   ::....:.|.|          |.|.||:.|:..||:.
Yeast    20 STSDEDAANNDPIGNDEDEDVCGICRASYNGTCPSCKFPGDQCPLVIGLCHHNFHDHCIYRWLDT 84

  Rat   372 DTS---CPTCRMSLNIADG---------------SRAREDHQGENLDENLV 404
            .||   ||.||.:..:..|               ||.||:...|.:.|..|
Yeast    85 PTSKGLCPMCRQTFQLQKGLAINDAHVQKFVEIVSRRREEMIEEGVAEEFV 135

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Amfr	XP_038954087.1	HRD1	86..>382	CDD:227568	24/77 (31%)
		RING-H2_AMFR	339..382	CDD:319369	19/67 (28%)
		CUE_AMFR	458..498	CDD:270604
		G2BR	575..600	CDD:375868
APC11	NP_010276.3	zf-ANAPC11	1..102	CDD:403920	24/81 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910