DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Amfr and rbx1

DIOPT Version :9

Sequence 1:	XP_038954087.1	Gene:	Amfr / 361367	RGDID:	1311551	Length:	643	Species:	Rattus norvegicus
Sequence 2:	NP_593388.1	Gene:	rbx1 / 2541897	PomBaseID:	SPAC23H4.18c	Length:	107	Species:	Schizosaccharomyces pombe

Alignment Length:	49	Identity:	14/49 - (28%)
Similarity:	18/49 - (36%)	Gaps:	13/49 - (26%)

- Green bases have known domain annotations that are detailed below.

  Rat   333 ELAVNND-----DCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCP 376
            |...|.|     :|.:.|.:        |.|.||..|:..||.....||
pombe    54 ECQANTDSAAAQECTVAWGT--------CNHAFHFHCISRWLNTRNVCP 94

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Amfr	XP_038954087.1	HRD1	86..>382	CDD:227568	14/49 (29%)
		RING-H2_AMFR	339..382	CDD:319369	12/43 (28%)
		CUE_AMFR	458..498	CDD:270604
		G2BR	575..600	CDD:375868
rbx1	NP_593388.1	APC11	19..107	CDD:227521	14/49 (29%)
rbx1	NP_593388.1	zf-rbx1	20..97	CDD:289448	14/49 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910