| Sequence 1: | XP_038954087.1 | Gene: | Amfr / 361367 | RGDID: | 1311551 | Length: | 643 | Species: | Rattus norvegicus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_035917.2 | Gene: | Amfr / 23802 | MGIID: | 1345634 | Length: | 639 | Species: | Mus musculus |
| Alignment Length: | 643 | Identity: | 630/643 - (97%) |
|---|---|---|---|
| Similarity: | 632/643 - (98%) | Gaps: | 4/643 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Rat 1 MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEDGSGEPEPLTAPLQPEALAPARLTP 65
Rat 66 GGPRVRDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKF 130
Rat 131 IFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLL 195
Rat 196 SCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYT 260
Rat 261 DFVMELMLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEAR 325
Rat 326 FAVATAEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADGSRA 390
Rat 391 REDHQGENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNS 455
Rat 456 QLNAMAHQIQEMFPQVPYHLVLQDLQMTRSVEITTDNILEGRIQVPFPVQRSDSLRPALNSPVER 520
Rat 521 PGTDLEEGEASVQTERVPLDLSPRLEETLDFSEVELEPVEVEDFEARGSRFSKSADERQRMLVQR 585
Rat 586 KDDLLQQARKRFLNKSSEDDGASERLLPSEGTSSDPVTLRRRMLAAAAERRLQRQQTT 643 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Amfr | XP_038954087.1 | HRD1 | 86..>382 | CDD:227568 | 293/295 (99%) |
| RING-H2_AMFR | 339..382 | CDD:319369 | 42/42 (100%) | ||
| CUE_AMFR | 458..498 | CDD:270604 | 39/39 (100%) | ||
| G2BR | 575..600 | CDD:375868 | 24/24 (100%) | ||
| Amfr | NP_035917.2 | HRD1 | 82..>378 | CDD:227568 | 293/295 (99%) |
| zf-RING_2 | 335..375 | CDD:290367 | 39/39 (100%) | ||
| CUE_AMFR | 454..494 | CDD:270604 | 39/39 (100%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 500..531 | 27/30 (90%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 594..620 | 25/25 (100%) | |||
| VCP/p97-interacting motif (VIM). /evidence=ECO:0000250|UniProtKB:Q9UKV5 | 618..636 | 17/17 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C55140270 | |
| Domainoid | 1 | 1.000 | 633 | 1.000 | Domainoid score | I5469 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H888 | |
| Inparanoid | 1 | 1.050 | 1233 | 1.000 | Inparanoid score | I4744 |
| OMA | 1 | 1.010 | - | - | QHG55068 | |
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0006872 | |
| OrthoInspector | 1 | 1.000 | - | - | oto176591 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105132 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR15067 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X3836 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 12.900 | |||||