Protein Alignment mms4 and EME1B

DIOPT Version :9

• Sequence 1: NP_610611.1
• Gene: mms4 / 36136
• FlyBaseID: FBgn0033549
• Length: 309
• Species: Drosophila melanogaster
• Sequence 2: NP_179804.5
• Gene: EME1B / 816748
• AraportID: AT2G22140
• Length: 551
• Species: Arabidopsis thaliana
• Alignment Length: 340
• Identity: 64/340 - (18%)
• Similarity: 124/340 - (36%)
• Gaps: 73/340 - (21%)

  Fly     2 SNKVDKLHKQALREQQKRIKPGE-CMKYVRMVIDAGFLGIPVGQEALQQLNATGLKYEIRSLPVS 65
            ::|.::..::.|.:::|:.:.|: .:|.:...||...|...:|...|.:.:..|:...:...|:.
plant   226 ASKAEEAERKRLEKEKKKWEKGKLALKSIVAEIDTKVLEGSIGGLLLSRFSEKGITIHVGPNPIE 290

  Fly    66 HCILWERNVGQQTIALGSSPTGLDEAWKSENQVVQWL----SESSFQRAVKDQSLVCLGPRLQDS 126
            ..|:|...:.:....|  .|.|         ..:.:|    ....|...|.:...:.:..|:||.
plant   291 RSIVWTMTIPEDIAPL--FPQG---------PKIPYLLLVYDAEEFCNLVANGKFLEIISRVQDR 344

  Fly   127 FPDCQYTIALPTLRHSKHGSSSSQDALIEMQLLQELHVEQLDQPES-------QDLVALLQRYTK 184
            :|  .||:...|.:              .|..:::...|:...|.:       :.|..|...|.|
plant   345 YP--SYTVCCLTNK--------------LMSYVKKREKEEYKNPGNWRRPPIDEVLAKLTTHYVK 393

  Fly   185 -----AIAEAPYKKQRNETLGGFKKYLAN---DKKQCVRVDQGNG-------------YGRLWQQ 228
                 .:.||    :..|.:.|....||:   .||..:.....||             ....|.:
plant   394 VHSRHCVDEA----EVAEHIVGLTSSLASCQFRKKLTMLSVSANGALVSKDSVDKHLIKKSPWLK 454

  Fly   229 HLNRLPMVTLEVAESIIAQYPCPKKLIDHFSSDPLAVQS----LADLKIKRCNGPQPLHTERRIG 289
            .|..:|.|....|.::..:||..|.|:..:.....:|..    |.|||::...|     .:.|:|
plant   455 ALVAIPKVQPRYALAVWKKYPSMKSLLKVYMDRNKSVHEKEFLLKDLKVEGLVG-----GDIRLG 514

  Fly   290 NVLSNKLYTLYTAKD 304
            .:.|.::|.:..:.|
plant   515 EICSKRIYRVLMSHD 529

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mms4	NP_610611.1	ERCC4	48..179	CDD:280828	21/141 (15%)
EME1B	NP_179804.5	XPF_nuclease_EME	253..422	CDD:410859	35/199 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR21077
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100