Protein Alignment mms4 and eme1

DIOPT Version :10

• Sequence 1: NP_610611.1
• Gene: mms4 / 36136
• FlyBaseID: FBgn0033549
• Length: 309
• Species: Drosophila melanogaster
• Sequence 2: XP_707096.1
• Gene: eme1 / 558350
• ZFINID: ZDB-GENE-030131-3191
• Length: 556
• Species: Danio rerio
• Alignment Length: 356
• Identity: 95/356 - (26%)
• Similarity: 160/356 - (44%)
• Gaps: 70/356 - (19%)

  Fly     7 KLHKQALREQQKRIKPGECMKYVRMVIDAGFLGIPVGQEALQQLNATGLK--YEIRSLPVSHCIL 69
            ::.|:||.:..|.::|.||:|:..:.:|.|.|.:..|...|..|:|.|..  .|.:|||.|.|
Zfish   205 RMEKKALADAVKALRPEECIKHTVVTVDPGLLQLEGGGALLTSLHAMGCNCAIEKQSLPRSVC-- 267

  Fly    70 W-ERNVGQQTIALGSSP--------------TGLDEAWKSENQVVQWLSESSFQRAVKDQSLVCL 119
            | .|:...|:..:.|.|              |.::...|.::..|  |:::........|.|:..
Zfish   268 WARRSPCPQSGEMKSFPESYTIIQVPVDDFVTMINSYCKRQSSSV--LTDTGISLTAWIQGLMSR 330

  Fly   120 GP---------------RLQDSFPDCQYTIALPTLRHSKH-GSSSSQ------------------ 150
            .|               |.|:|  .||.......|...|: |....|
Zfish   331 NPGRSLSLVVIDIEKYFRSQNS--KCQKKYREAVLGEEKNVGLQGGQKKRRKKDDINQLPEVSRV 393

  Fly   151 ---DALIEMQLLQELHVEQLDQPESQDLVALLQRYTKAIAEAPYKKQRNETLGGFKKYLANDKKQ 212
               :||:::||...:.|..|.  ..:|....:...|||:||||:|::|.:|  ||...|.::...
Zfish   394 QVEEALVDLQLQTGVQVRFLS--TWKDFTDYITMSTKAVAEAPFKREREKT--GFTFCLESEWAG 454

  Fly   213 CVRVDQ-GNGYGRLWQQHLNRLPMVTLEVAESIIAQYPCPKKLIDHFS---SDPLAVQSLADLKI 273
            ..:||: |||..::|::.:.:|..|:|::|.:|::.||.|:.|...::   |:...|..|:||.|
Zfish   455 GQKVDRTGNGLLQVWKRQIQQLNRVSLDMASAILSAYPSPRLLAQAYTRCRSEQEKVGLLSDLLI 519

  Fly   274 KRCNGPQPLHTERRIGNVLSNKLYTLYTAKD 304
            :|  |.....|.||:|..||.::|.:.|:.|
Zfish   520 RR--GEGVTSTTRRVGPELSKRVYLMMTSSD 548

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mms4	NP_610611.1	XPF_nuclease_EME	28..192	CDD:410859	49/217 (23%)
eme1	XP_707096.1	XPF_nuclease-like	219..439	CDD:425391	54/227 (24%)