Protein Alignment mms4 and Eme2

DIOPT Version :9

• Sequence 1: NP_610611.1
• Gene: mms4 / 36136
• FlyBaseID: FBgn0033549
• Length: 309
• Species: Drosophila melanogaster
• Sequence 2: XP_038943019.1
• Gene: Eme2 / 302982
• RGDID: 1304924
• Length: 379
• Species: Rattus norvegicus
• Alignment Length: 342
• Identity: 80/342 - (23%)
• Similarity: 141/342 - (41%)
• Gaps: 69/342 - (20%)

  Fly    14 REQQKRIKPGECMKYVRMVIDAGFL---GIPVGQEALQQLNATGLKYEIRSLPVSHCILWERNVG 75
            |...|.::..:.::.:.:.:|...|   |..:..|||..|   |.:..|.....:..:.|  :|.
  Rat    57 RAAAKALRADQVLERLVVCVDPAVLEDAGSDILMEALGTL---GCECRIEPQHQARSLQW--SVV 116

  Fly    76 QQTIALGSSPTGLDEAWKSENQVVQWL---SESSFQRAVKDQSLV---CLGPRLQDSFPDCQY-- 132
            :...||.:.|    :..|:||:..|.|   .:...|.||:...:.   |..|.|....|...:
  Rat   117 RPDPALSNVP----QEGKAENEQEQLLLLEPQEFLQGAVQLTQMTDPPCSVPWLSPESPTRSHLA 177

  Fly   133 TIALPT-----LRHSKHGS--------------------SSSQDALIEMQLLQELHVEQLDQPES 172
            .|.|..     |:..:.||                    |..::||:.:||...|.|  |.....
  Rat   178 VIGLDAYLWYHLQPQRGGSQKTWPPKKSEEAQARVAISWSEVEEALVLLQLHANLDV--LLVASW 240

  Fly   173 QDLVALLQRYTKAIAEAPYKKQRNE------TLGGFKKYLANDKKQCVRVDQGNGYGRLWQQHLN 231
            ::|...:..:|||:|:.|.|:.|:.      |.|.:.     ..:|..|  .|:|...:|.:.:.
  Rat   241 RELSQYVCAFTKALAQLPSKRFRDSQAFSFCTAGHWA-----SGQQVTR--DGSGLRGVWWRQIR 298

  Fly   232 RLPMVTLEVAESIIAQYPCPK----KLIDHFSSDPLAVQSLADLKIKRCNGPQPLHTERRIGNVL 292
            :...|:..||::::..:|.|:    .|:| .|::...:..||||.:|...|.||    ||:|..|
  Rat   299 QFNRVSPAVADAVVTAFPSPRLLQQALLD-CSTEQERLSLLADLPVKAPGGKQP----RRVGPDL 358

  Fly   293 SNKLYTLYTAKDPNTLI 309
            |.::....|..:|:.|:
  Rat   359 SRRICIFLTTTNPDILL 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mms4	NP_610611.1	ERCC4	48..179	CDD:280828	34/163 (21%)
Eme2	XP_038943019.1	XPF_nuclease-like	66..260	CDD:425391	45/204 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166340559
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	77	1.000	Inparanoid score	I5151
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1595761at2759
OrthoFinder	1	1.000	-	-		FOG0004634
OrthoInspector	1	1.000	-	-		otm44557
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR21077
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.000