Protein Alignment mms4 and eme2

DIOPT Version :10

• Sequence 1: NP_610611.1
• Gene: mms4 / 36136
• FlyBaseID: FBgn0033549
• Length: 309
• Species: Drosophila melanogaster
• Sequence 2: NP_001428421.1
• Gene: eme2 / 100332307
• ZFINID: ZDB-GENE-121226-1
• Length: 429
• Species: Danio rerio
• Alignment Length: 365
• Identity: 81/365 - (22%)
• Similarity: 153/365 - (41%)
• Gaps: 85/365 - (23%)

  Fly     1 MSNKVDKLHKQALREQQKR---------IKPGECMKYVRMVIDAGFL---GIPVGQEALQQLNAT 53
            :..:.:||.::.|:::|:|         :||...:|.:.:.|.|..|   |..|   .|:.|:..
Zfish    93 LKEEKNKLKEEKLQDRQRRKDAAVKLNLLKPENVIKSLTVHIHAVLLRDGGCDV---LLRTLDGL 154

  Fly    54 GLKYEIRSLPVSHCILWERN------------VGQQTIALGSSPTGLDEAWKSENQV-------- 98
            ..:..|.:..:.:.|.|.|.            :.:..:.:..||..|::...|...|
Zfish   155 QWRNRIENEGLPNSISWTRQALQTEDEEKHAVIEEDQLLMVISPDELEDMLSSHKTVSNLSAPIG 219

  Fly    99 -VQWLSESSFQRAVKDQS--------LVCLG-PRLQDSFPDCQYTIALPTLRHSKHGSSSSQDAL 153
             :...:||..|...|..|        ::.:| .|...|:.:.:....|     ::| ...:::.|
Zfish   220 EIHEGAESLLQHLYKYLSRTEGKVVTILVIGYQRRSASWDEDELDFQL-----NEH-HMDTEELL 278

  Fly   154 IEMQLLQELHVEQLD--QPESQDLVALLQRYTKAIAEAPYKKQRNETLGGFKKYLANDKKQC--- 213
            :.:||...:.|..|.  |..:..:||:    |||:::.|||....|...||          |
Zfish   279 VHLQLYWNITVRFLSSWQEVTNHVVAV----TKALSKRPYKALCVEPDLGF----------CMDG 329

  Fly   214 -----VRVDQ-GNGYGRLWQQHLNRLPMVTLEVAESIIAQYPCPKKLIDHFSSDPLAVQS---LA 269
                 ||||: |.|..::|.:.:.:|..|:..||:::.:.:|.|..|:..:...|...:.   ||
Zfish   330 SWSAGVRVDRDGRGLAQVWTRQIQQLNRVSTAVAKTVTSAFPSPSLLLQAYDELPSGEEPRKLLA 394

  Fly   270 DLKIKRCNGPQPLHTERRIGNVLSNKLYTLYTAKDPNTLI 309
            ||.:  ..|.    .|||:|..|:.:::.|.|:::|..|:
Zfish   395 DLMV--VGGA----NERRVGPELAGRIHRLLTSQNPQLLL 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mms4	NP_610611.1	XPF_nuclease_EME	28..192	CDD:410859	38/198 (19%)
eme2	NP_001428421.1	None