DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12935 and Tmem223

DIOPT Version :10

Sequence 1:NP_610609.1 Gene:CG12935 / 36134 FlyBaseID:FBgn0033547 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001178033.1 Gene:Tmem223 / 690285 RGDID:1582829 Length:199 Species:Rattus norvegicus


Alignment Length:184 Identity:63/184 - (34%)
Similarity:94/184 - (51%) Gaps:15/184 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VNTSVPKDIILFKYENPRFYQMLNFFGVCQFVFWTYLSHFAFTTLKDAPVVEKPGEELKWFQRIN 117
            :.:.||:|::||::|..||:.:|..|...|.:|||.|:..|.    ..|::..|.|      ..|
  Rat    26 LQSGVPRDVLLFEHERSRFFAILGLFCAGQSIFWTSLAVAAL----PKPLIRVPAE------APN 80

  Fly   118 LGDNKYRNGITACSFLIGYGILFAV-----WMFTLRSVRFLILRKGGQSVSFVTYGPFNRNRIMT 177
            .|....|:.:......:|.|::.|:     .:::|||||.::|..|||.|:..||.||......|
  Rat    81 RGSLDLRSALWRYGLAVGCGMMGALVPGAGLLYSLRSVRSVMLLAGGQQVTLTTYAPFGLGTHFT 145

  Fly   178 VPLKCVSAEESRNMARVQLPIKVKGKTLYYVLDMRGEFRNGELFDYTAGLKRRI 231
            |||..:|....|......||:||||:..|::||..|.|.|..|||.|.|..|.:
  Rat   146 VPLNQISCMAHRGEVPAMLPLKVKGRRFYFLLDKAGHFPNTLLFDNTVGTYRSL 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12935NP_610609.1 TMEM70 59..227 CDD:462058 59/172 (34%)
Tmem223NP_001178033.1 TMEM70 32..194 CDD:462058 59/171 (35%)

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