DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wde and atf7ip

DIOPT Version :9

Sequence 1:NP_001286294.1 Gene:wde / 36133 FlyBaseID:FBgn0027499 Length:1420 Species:Drosophila melanogaster
Sequence 2:XP_005160098.1 Gene:atf7ip / 558977 ZFINID:ZDB-GENE-061103-178 Length:860 Species:Danio rerio


Alignment Length:1033 Identity:243/1033 - (23%)
Similarity:377/1033 - (36%) Gaps:281/1033 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 TEEPE-NKKEIEDTEELEEPVVIEGEET--EDPQKKV-QKEFDVRTADHEMNYTTIDDKLDEAVK 520
            ||:|: ...:|.:.:....|.:::.|..  |:||||: :....::.:|.:.              
Zfish    21 TEDPQATACQIHEQDSSRHPSLVKMEVAVPEEPQKKIFRARKTMKMSDRQQ-------------- 71

  Fly   521 DVVEIEEKKAAEDELGVIPKGDKEPTTNGACEISTDGNLKDLESNESTVVEEETKETESDDEVIF 585
              :|:.....|.....:.....:.|..||. ...|:   |||.:.|..::...|..........|
Zfish    72 --LEVLHNTLATTNSSLSSSPPQTPLMNGT-HTETE---KDLNNKEGDLMAPATDSARCSPSPSF 130

  Fly   586 FEPLDKTENVGTTANPTNENSVKPQAKDDEVVLVSEDEDETPQNGISEKEVQTIQKETALKGLPN 650
                    .|..:.:|.|..:..| |.|.|..||:.:|                :|||:     |
Zfish   131 --------PVSRSPSPPNTQTTSP-AMDLEDPLVATEE----------------KKETS-----N 165

  Fly   651 ESTTESVEAKNLQIDNSDNACDQFEKLKTHDMVKQTTTEDGNSNSSNLLRPAEYAEESVPKRLRL 715
            :|::.|..|....::......:.|..|...|.. |...::.:|:...:...||..::.       
Zfish   166 KSSSSSPSASPAGLNCDPEVKEGFLCLSEEDET-QADKDEKDSSEEKMNVDAETEDQK------- 222

  Fly   716 STDEKNEFEAET--NQE---SLPILSRAEGGLKDVTKRSHEHLDSSPQEEIPNKKAKTEDSDSNS 775
              :||:|.:.:|  |.|   |.|:      |||.......:..|...:||...|:|:.|..:..:
Zfish   223 --EEKDEKDTDTPENAEADNSAPV------GLKRTLSEEKDEDDKEIEEERDGKRARLEGEELEA 279

  Fly   776 SHEGTLQIDMGGQEDKEESPKKDTQKKLDFDLNPVPEIKQNVKPLRLEFFKTFRRSFDTMTRDDL 840
            ..|  |:|...|.                                               .||.:
Zfish   280 QLE--LKITANGG-----------------------------------------------NRDKI 295

  Fly   841 EELVLQKVVEAMMVKSDFAEIRMQL---DKCESTLANYRRKIAEVSKQFLDLETVHKRVLKDLEA 902
            |::|.|.|.|.:.|        :||   |:....|.:...||..|:||...|:.::     .|:|
Zfish   296 EKMVQQLVEERLRV--------LQLTVFDRSLKELKDRVEKIDNVTKQQNALQHIN-----TLQA 347

  Fly   903 KNSHFTAPVRITRAVGLQVGIPFKAIKPTVAAPESTHAAGSVLAPPSGTP---------PKASTS 958
            |.|      |:.:..|........| |.|..|..:..||.:..|..:.||         .|.|:|
Zfish   348 KIS------RLAKKFGAANQASENA-KRTQDAQAAAAAAQANNATNATTPQRTVKTTVDSKLSSS 405

  Fly   959 PT--RATVRPRPPPPTFGPSTSSSETGAG-------VSVTPNSNHQQQQPAARSSQSLTTASVTP 1014
            ||  .:|..|..|.|...|:|.:|...|.       :|.|.:|        ..||.||...|.|.
Zfish   406 PTVSNSTAVPAQPKPLSTPATPTSSALATTAPILQIISTTTSS--------TPSSTSLPGQSQTG 462

  Fly  1015 PVRRGCLQKVTPHRPVPTNLQPA-----PMLMNQSSVQRLQSSPPIAQRT------MHASKHTG- 1067
            .:    |.|..|:..|.|| .||     |:.|.|..:|.     |:|...      ::|:...| 
Zfish   463 TL----LLKTGPNPTVMTN-APATSGGQPVAMQQLLIQL-----PLAMANGQSGALVNAAGGVGL 517

  Fly  1068 TPGSTPSSVANAINKTVMRARNSEAAFLAQKQQQKQHQQQQQQQQQHLQQQQKQQQAQQQFLLPR 1132
            .|.|:.|:|:| |||.  :.......|:.||...              ........|....|...
Zfish   518 IPVSSLSTVSN-INKA--KTTTPATTFMLQKTAG--------------NVSSATSSAPAVSLARA 565

  Fly  1133 PSPGPT-PGSSPAKQVPKCTTKVRAKQPPLSGATVSVPISSSS--------SGSELGSYGQQQES 1188
            ..||.| ..|||...:...|    |:.|....|.|.|..:::|        :||...:.|....|
Zfish   566 VYPGGTGTVSSPNTGISVTT----ARTPTQCAAVVGVSTAAASPGTTGPAATGSAAAAAGSPSAS 626

  Fly  1189 SLA---------------PAKPKEKAVIDLTDEDDAAAAAAARAAQAQNARLRMEMLKRNAQTAA 1238
            :||               |.:|| .:|||||::||.......:.|..               :..
Zfish   627 ALASKTDNQASTPKTASQPGRPK-GSVIDLTEDDDDVQVTGVQKATV---------------SPV 675

  Fly  1239 ATRGGRGGGNVVRASPMQLPRVNARQIVHNNGGGQQSPLGSNVTMQIRSENTPPPASRLRYSHPA 1303
            .|:...|...:|.::|             |.|.|.:|...|.|....:|.   |.:|......|.
Zfish   676 TTQRSSGPPPLVSSTP-------------NTGTGVRSAQRSTVDSPSQSR---PSSSSSTSLPPL 724

  Fly  1304 PLPTSPPQPFNP--SWKVPPSRPVIRISLLDT--GIVISWTLEDSSPRFAECVMYQIYAY----Q 1360
            ||..|||....|  :...||.:|.::::.:.:  |||:||.:.::....|....|.:|||    |
Zfish   725 PLAPSPPARLPPEANHTSPPQQPQLKLARVQSQNGIVLSWCVAETDRNCAAVDTYHLYAYHQDHQ 789

  Fly  1361 ETINEPSTDS-WRHVGDVSAMLLPMAVTLNQFQENQRYYFAVRGVDSHERFGPFSVPK 1417
            .:::..|... |:.:|:|.|:.||||.||.||.....||||||..|.:.|||||..|:
Zfish   790 SSVSGASAQMLWKKIGEVKALPLPMACTLTQFVSGSTYYFAVRAKDVYGRFGPFCEPQ 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdeNP_001286294.1 fn3_4 1320..1418 CDD:293399 40/105 (38%)
atf7ipXP_005160098.1 PPP4R2 <84..229 CDD:286293 37/188 (20%)
ATF7IP_BD 267..>433 CDD:293393 52/234 (22%)
fn3_4 743..848 CDD:293399 40/105 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582053
Domainoid 1 1.000 77 1.000 Domainoid score I8854
eggNOG 1 0.900 - - E1_28K6G
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007416
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23210
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.890

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