DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33144 and AT4G19670

DIOPT Version :10

Sequence 1:NP_788324.1 Gene:CG33144 / 36131 FlyBaseID:FBgn0053144 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_193702.1 Gene:AT4G19670 / 827711 AraportID:AT4G19670 Length:532 Species:Arabidopsis thaliana


Alignment Length:313 Identity:82/313 - (26%)
Similarity:118/313 - (37%) Gaps:93/313 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   745 DGIALKRR------EMLASADVTPSVGTPATPTTAFKPF-TCKLCLIDVEDVGEAMALQQCGCQF 802
            :|..||..      |.|:.|.|  :||..::.....||. .|.:|..|.:  .|.|...:|..:|
plant   168 NGFVLKLAPFCDLDEALSLAQV--AVGIVSSNLDGDKPIENCSICCEDRQ--SEMMLSLKCTHKF 228

  Fly   803 CIECMRAYVEFEISEGAYEISCPDATC-----PAQGAISLP-------EIANLTTTNLLKKHHRY 855
            |..||:.|||.::......|.||...|     .|:....||       |.||:.:.|        
plant   229 CSHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECKSFLPVTTFKSFEEANVCSKN-------- 285

  Fly   856 RLNREIELDKTRTWCPRAGCETICTVGAAAQPGQSSVICQMDESPSTSQSYSPQQEVAGNGSTGA 920
              |.:|       :||...|..:.........|::|       |.|::||.:             
plant   286 --NGKI-------YCPYPNCSFLLDPQECLSSGRAS-------SSSSTQSEN------------- 321

  Fly   921 AAGNGAPVLSVSVHCPSCKDEFCGLCKKAYHPNISCDEFGRRLIADGQ--DDIGIPFDNELIKC- 982
                     |..|.||.|:...|..|...:|.::||:|| :.|..|.:  |||.:   :.|.:. 
plant   322 ---------SCCVECPVCERFVCVDCGVPWHASMSCEEF-QILPVDERYPDDITL---HRLARYK 373

  Fly   983 ----CPMCAVPIEKDEGCAQMMCKRCKHVFCWYC------------LASLDDD 1019
                |..|.:.||..:||..|.| ||.|.||:.|            .|..|||
plant   374 RWRRCQQCRIMIELAQGCNHMTC-RCGHEFCYSCGAEYREGQQTCTCAFWDDD 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33144NP_788324.1 mRING-HC-C4C4_RBR_RNF144 777..829 CDD:438294 16/52 (31%)
BRcat_RBR_RNF144 860..961 CDD:439010 22/100 (22%)
Rcat_RBR_RNF144 976..1045 CDD:439013 19/61 (31%)
AT4G19670NP_193702.1 RNase_H_like 76..173 CDD:449355 1/4 (25%)
RING_Ubox 207..256 CDD:473075 16/50 (32%)
BRcat_RBR_unk 286..351 CDD:439033 21/100 (21%)
Rcat_RBR_unk 374..410 CDD:439035 14/36 (39%)

Return to query results.
Submit another query.