DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33144 and Sharpin

DIOPT Version :10

Sequence 1:NP_788324.1 Gene:CG33144 / 36131 FlyBaseID:FBgn0053144 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_112415.1 Gene:Sharpin / 81859 RGDID:631353 Length:381 Species:Rattus norvegicus


Alignment Length:301 Identity:64/301 - (21%)
Similarity:88/301 - (29%) Gaps:103/301 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 SGGATANSTSPSPPSNVTTATLHSSSANNL----NQEPQQSTSTPATTPTETPGSGELG-----P 714
            :|||.|.:...||     ...|...:|..|    :::..|..........|.||...||     |
  Rat     5 AGGAAAAADPASP-----VVLLAVQAAVRLLGAGHEDEAQLRKLQLKADPERPGRFRLGLLGIEP 64

  Fly   715 FGTNHAYPL-----------------------TVSSLLSMASANQAAQ-ACCVRDGIALKRREML 755
            ...:..:||                       |.|  :...::.:|.| |..|||..|    |..
  Rat    65 GAVSLEWPLESICYTIRGPNQHELQPPPGGPGTFS--VHFLNSEEAQQWAALVRDATA----EGQ 123

  Fly   756 ASADVTPSVGTPA-----------TPT-TAFKPFTCKLCLIDVEDVGEAMALQQCGCQFCIECMR 808
            ...|.|..|.|||           ||| .|.:|                                
  Rat   124 NGNDSTAPVPTPAMCPTSPPCSSVTPTPKATQP-------------------------------- 156

  Fly   809 AYVEFEISEGAYEISCPD-ATCPAQGAISLPEIANLTTTNLLKKHHRYRLNREIELDKTRTWCPR 872
               |.::.:|:..:...: ||..||......|.|......:|.:|| ..||.::    ...|.||
  Rat   157 ---EMDLPQGSGNLKKEELATHLAQAIAGGDEKAAAQVAAILAQHH-VALNVQL----LEAWFPR 213

  Fly   873 AGCETICTVGAAAQPGQSSVICQMDESPSTSQSYSPQQEVA 913
            .......||..|.....||      .|...|....|...:|
  Rat   214 GPIRLQVTVEDATSVLSSS------SSAHVSLQIHPHCSIA 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33144NP_788324.1 mRING-HC-C4C4_RBR_RNF144 777..829 CDD:438294 3/52 (6%)
BRcat_RBR_RNF144 860..961 CDD:439010 12/54 (22%)
Rcat_RBR_RNF144 976..1045 CDD:439013
SharpinNP_112415.1 Self-association. /evidence=ECO:0000269|PubMed:11178875 1..177 43/217 (20%)
Sharpin_PH 18..125 CDD:465263 22/112 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..153 10/31 (32%)
Interaction with SHANK1. /evidence=ECO:0000269|PubMed:11178875 172..305 23/88 (26%)
Ubl_HOIL1 215..299 CDD:340497 9/40 (23%)
zf-RanBP 346..370 CDD:395516
RanBP2-type Zn finger 346..365 CDD:275376
Blue background indicates that the domain is not in the aligned region.

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