DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33144 and Rnf19b

DIOPT Version :10

Sequence 1:NP_788324.1 Gene:CG33144 / 36131 FlyBaseID:FBgn0053144 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001355692.1 Gene:Rnf19b / 75234 MGIID:1922484 Length:732 Species:Mus musculus


Alignment Length:485 Identity:112/485 - (23%)
Similarity:164/485 - (33%) Gaps:134/485 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   624 APRPTSALNHLEAGWEDDQRRAQEPHINVNAQIRLSGGATANSTSPSPPSNVTTATLHSSSANNL 688
            :||.||    |.|...|.:.|              |||.....|..|    |.:|   |:.....
Mouse     9 SPRSTS----LHAAAPDPKCR--------------SGGRRRRLTFHS----VFSA---SARGRRA 48

  Fly   689 NQEPQQSTSTPATTPTETPGSGELGPFGTNHAYPLTVSSLLSMASANQAAQACCVRDGIALKRRE 753
            ..:||.....||..|...|.:    |.......| .|.:|.|..:|...|:|      :|....|
Mouse    49 RTKPQAEPPPPAAPPPPPPPA----PAPVEAQAP-PVEALPSEPAAEAEAEA------VAAGPEE 102

  Fly   754 MLASADVTPSVGTPATPTTAFKPFTCKLCLIDVEDVGEAMALQQCGCQFCIECMRAYVEFEISEG 818
                        ..|......:...|.|||:.:.. ..|..|..|..:.|.:|:|.|:..||||.
Mouse   103 ------------DEAAEGGGAEEVECPLCLVRLPP-ERAPRLLSCPHRSCRDCLRHYLRLEISES 154

  Fly   819 AYEISCPDATCPAQGAISLPEIAN-------LTTTNLLKKHHRYRLNREIELDKTRTWCPRAGC- 875
            ...||||:.:          |..|       |....|:.|:..:.|.|.:..|....|||...| 
Mouse   155 RVPISCPECS----------ERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCG 209

  Fly   876 ETICTVGAAAQPGQSSVICQMDESPSTSQSYSPQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKD 940
            ..:...|.|:.|   .:.|:.:                                       .|:.
Mouse   210 YAVIAYGCASCP---KLTCERE---------------------------------------GCQT 232

  Fly   941 EFCGLCKKAYHPNISCD----EFGRRLIADGQDDIGIPFDNEL-----IKCCPMCAVPIEK--DE 994
            |||..||:.:|||.:||    :..:.|....:...|:.:..|.     ||.||.|:..|.|  |.
Mouse   233 EFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGPADDIKPCPRCSAYIIKMNDG 297

  Fly   995 GCAQMMCKRCKHVFCWYCLASLDDDFLLRHYDKGPCK---NKLGHSRASVVWHRAQVIGIFAGFG 1056
            .|..|.|..|...|||.|:..:.|   |.:.....|.   .|....:..::|....:||...|..
Mouse   298 SCNHMTCAVCGCEFCWLCMKEISD---LHYLSPSGCTFWGKKPWSRKKKILWQLGTLIGAPVGIS 359

  Fly  1057 ILLLVASPLLLLAAPCIICCKCRGCTGSKI 1086
            ::..:|.|.:::..|..:        |.||
Mouse   360 LIAGIAIPAMVIGIPVYV--------GRKI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33144NP_788324.1 mRING-HC-C4C4_RBR_RNF144 777..829 CDD:438294 19/51 (37%)
BRcat_RBR_RNF144 860..961 CDD:439010 20/105 (19%)
Rcat_RBR_RNF144 976..1045 CDD:439013 22/78 (28%)
Rnf19bNP_001355692.1 Required for ubiquitin ligase activity and for protection against staurosporin-induced cell death. /evidence=ECO:0000250|UniProtKB:Q6ZMZ0 1..315 97/406 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109 33/147 (22%)
TRIAD supradomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01221 112..334 68/277 (25%)
RING-HC_RBR_RNF19B 116..176 CDD:438432 21/70 (30%)
BRcat-RBR_RNF19B 181..255 CDD:439024 24/115 (21%)
Rcat_RBR_RNF19 278..346 CDD:439016 20/70 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..644
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 660..732
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.