DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33144 and Rnf144a

DIOPT Version :10

Sequence 1:NP_788324.1 Gene:CG33144 / 36131 FlyBaseID:FBgn0053144 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001075879.1 Gene:Rnf144a / 500636 RGDID:1561737 Length:292 Species:Rattus norvegicus


Alignment Length:335 Identity:146/335 - (43%)
Similarity:181/335 - (54%) Gaps:67/335 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   771 TTAFKP---------FTCKLCLIDVEDVGEAMALQ-----QCGCQFCIECMRAYVEFEISEG-AY 820
            |..::|         .:|||||      ||..|.|     ||.|.||..|::.|||..|.|| ..
  Rat     3 TARYRPTWDLALDPLVSCKLCL------GEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLET 61

  Fly   821 EISCPDATCPAQGAISLPEIANLTTTNLLKKHHRYRLNREIELDKTRTWCPRAGCETICTVGAAA 885
            .||||||.||.||.:...||..:....:::::.:.:..||:..|..|||||.:.|:.:|.:    
  Rat    62 AISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQL---- 122

  Fly   886 QPGQSSVICQMDESPSTSQSYSPQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKDEFCGLCKKAY 950
                                    |::          |...|.|   |.|.:|..|||..||..:
  Rat   123 ------------------------QDI----------GLQTPQL---VQCKACDMEFCSACKARW 150

  Fly   951 HPNISCDEFGRRLIADGQDDIGIPFD--NELIKCCPMCAVPIEKDEGCAQMMCKRCKHVFCWYCL 1013
            ||...|.|........|:.......:  :..||.||.|.|.||:||||||||||.|||.||||||
  Rat   151 HPGQGCPETMPISFLPGETSSAFKVEEGDAPIKRCPKCRVYIERDEGCAQMMCKNCKHAFCWYCL 215

  Fly  1014 ASLDDDFLLRHYDKGPCKNKLGHSRASVVWHRAQVIGIFAGFGILLLVASPLLLLAAPCIICCKC 1078
            .||||||||.|||||||:||||||||||:|||.||:|||||||:|||||||.||||.|.::||||
  Rat   216 ESLDDDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVGIFAGFGLLLLVASPFLLLATPFVLCCKC 280

  Fly  1079 RGCTGSKIDE 1088
            : |  ||.|:
  Rat   281 K-C--SKGDD 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33144NP_788324.1 mRING-HC-C4C4_RBR_RNF144 777..829 CDD:438294 27/57 (47%)
BRcat_RBR_RNF144 860..961 CDD:439010 25/100 (25%)
Rcat_RBR_RNF144 976..1045 CDD:439013 53/70 (76%)
Rnf144aNP_001075879.1 mRING-HC-C4C4_RBR_RNF144A 18..72 CDD:438433 28/59 (47%)
BRcat_RBR_RNF144A 99..163 CDD:439027 26/104 (25%)
Rcat_RBR_RNF144 179..247 CDD:439013 53/67 (79%)

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