DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33144 and rbck1

DIOPT Version :10

Sequence 1:NP_788324.1 Gene:CG33144 / 36131 FlyBaseID:FBgn0053144 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001002168.1 Gene:rbck1 / 431715 ZFINID:ZDB-GENE-040704-3 Length:515 Species:Danio rerio


Alignment Length:409 Identity:83/409 - (20%)
Similarity:130/409 - (31%) Gaps:113/409 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   639 EDDQRRAQEPHINVNAQI----------RLSGGATANSTSPSPPSNVTTATLHSSSANNLNQEPQ 693
            |.::|..:|..|:|..:.          |::.|.|..:..|.|......|....:..|...:...
Zfish   147 EQERREKEERQIDVIMETIERPLQRPPERITRGNTRPALPPKPKFLDGWACPQCTYLNKPTRPGC 211

  Fly   694 QSTSTPATTPTETPGSGELGPFGTNHAYPLTVSSLLSMASANQAAQACCVRDGIALKRR-EMLAS 757
            :..||......:.|...:.....|.......::||....|..|..:    |:.:..:|. |.|..
Zfish   212 EMCSTARPDNYQVPDLYQPDESETRRLQQEELASLQYEQSLLQEEE----RNFLERQRNYEELLQ 272

  Fly   758 ADVTPSVGTPATPTTAFKPFTCKLCLIDVEDVGEAMALQQCGCQFCIECMRAYVEFEISEGAYEI 822
            .|....||..       ....|.:|...:.. ||...|::|...||.:|::..|          :
Zfish   273 TDAHSLVGNT-------DQLECAICFGTIMP-GEGAVLRECLHSFCRDCLKGTV----------V 319

  Fly   823 SCPDA--TCP-------AQGAISLPEIANLTTTNLLKKHHRYRLNREIELDKTRTWCPRAGCETI 878
            :|.||  .||       ....:...||.:|.|.:..:|....|||......:....|....|...
Zfish   320 NCLDAEVCCPYGDNAYACNCKLQDREIKSLLTQDEYQKFLELRLNIAESRSENSYHCKTPDCAGW 384

  Fly   879 CTVGAAAQPGQSSVICQMDESPSTSQSYSPQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKDEFC 943
            |             |.:.|.:                                ...|..|.:..|
Zfish   385 C-------------IFEDDVN--------------------------------EFKCDICNETNC 404

  Fly   944 GLCKKAYHPNISCDEFGRRLIADGQDDIGIPFDN------------ELIK-----CCPMCAVPIE 991
            .|| ||.|..::|.|:        |||:.:...|            :|:|     .||.|.|.::
Zfish   405 LLC-KAIHKGMNCKEY--------QDDLRVRAQNDEAARQTTEMLDQLLKNGEAMNCPKCQVIVQ 460

  Fly   992 KDEGCAQMMCKRCKHVFCW 1010
            |.:||..:.|..||...||
Zfish   461 KKDGCDWICCLMCKTEICW 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33144NP_788324.1 mRING-HC-C4C4_RBR_RNF144 777..829 CDD:438294 13/53 (25%)
BRcat_RBR_RNF144 860..961 CDD:439010 15/100 (15%)
Rcat_RBR_RNF144 976..1045 CDD:439013 15/52 (29%)
rbck1NP_001002168.1 Ubl1_cv_Nsp3_N-like 58..139 CDD:475130
ZnF_RBZ 195..216 CDD:197784 2/20 (10%)
RanBP2-type Zn finger 195..214 CDD:275376 2/18 (11%)
mRING-HC-C3HC3D_RBR_HOIL1 278..333 CDD:438295 17/72 (24%)
BRcat_RBR_HOIL1 366..430 CDD:439006 18/117 (15%)
Rcat_RBR_HOIL1 443..515 CDD:439019 14/37 (38%)
Blue background indicates that the domain is not in the aligned region.

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