DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33144 and rnf144b

DIOPT Version :10

Sequence 1:NP_788324.1 Gene:CG33144 / 36131 FlyBaseID:FBgn0053144 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_957431.2 Gene:rnf144b / 394112 ZFINID:ZDB-GENE-040426-1292 Length:312 Species:Danio rerio


Alignment Length:314 Identity:129/314 - (41%)
Similarity:170/314 - (54%) Gaps:55/314 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   779 CKLCLIDVEDVGEAMALQQCGCQFCIECMRAYVEFEISEGA-YEISCPDATCPAQGAISLPEIAN 842
            |||||.|..: .|...||.|.|.||.:|:|.||:..|..|| ..|:|||..|...|.:...|:|:
Zfish    30 CKLCLSDWPE-AETCTLQSCSCVFCAQCLRQYVQLAIRAGAGSAITCPDPACKNSGTLLDSELAS 93

  Fly   843 LTTTNLLKKHHRYRLNREIELDKTRTWCPRAGCETICTVGAAAQPGQSSVICQMDESPSTSQSYS 907
            ...::.::.:.|.|..|.::||.::.|||...|:.:|:|                 :|.|     
Zfish    94 FAPSDQVELYQRLRFERGVQLDPSKAWCPVLACQAVCSV-----------------TPGT----- 136

  Fly   908 PQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKDEFCGLCKKAYHPNISCDEFGRRL---IADG-- 967
                            .|.|   |.|.||.|:..||..|:..:....|| ...:.|   :.||  
Zfish   137 ----------------EGTP---VPVPCPVCQTVFCCCCRSPWSDGHSC-SLQQPLMPPLPDGAL 181

  Fly   968 -QDDIGIPFDNELIKCCPMCAVPIEKDEGCAQMMCKRCKHVFCWYCLASLDDDFLLRHYDKGPCK 1031
             .||     ....||.||:|.|.||:::|||||:||.|||.||||||.:||.|..|||||||||:
Zfish   182 SSDD-----TEAAIKQCPVCGVYIERNQGCAQMLCKSCKHTFCWYCLQNLDGDIFLRHYDKGPCR 241

  Fly  1032 NKLGHSRASVVWHRAQVIGIFAGFGILLLVASPLLLLAAPCIICCKCRGCTGSK 1085
            ||||||||||:|:|.||:||..|..|::||.|||||||:|||:||.|:.|...|
Zfish   242 NKLGHSRASVMWNRTQVVGILVGASIIVLVTSPLLLLASPCILCCVCKPCHAKK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33144NP_788324.1 mRING-HC-C4C4_RBR_RNF144 777..829 CDD:438294 24/50 (48%)
BRcat_RBR_RNF144 860..961 CDD:439010 22/100 (22%)
Rcat_RBR_RNF144 976..1045 CDD:439013 47/68 (69%)
rnf144bNP_957431.2 mRING-HC-C4C4_RBR_RNF144 28..80 CDD:438294 24/50 (48%)
BRcat_Rcat_RBR 112..174 CDD:459240 23/103 (22%)
Rcat_RBR_RNF144B 185..255 CDD:439030 48/74 (65%)

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