DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33144 and Rnf19b

DIOPT Version :9

Sequence 1:NP_001188904.1 Gene:CG33144 / 36131 FlyBaseID:FBgn0053144 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_008762369.2 Gene:Rnf19b / 313806 RGDID:1305470 Length:730 Species:Rattus norvegicus


Alignment Length:496 Identity:114/496 - (22%)
Similarity:162/496 - (32%) Gaps:160/496 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   624 APRPTSALNHLEAGWEDDQRRAQEPHINVNAQIRLSGGATANSTSPSPPSNVTTATLHSSSANNL 688
            :||.||    |.|...|.:.|              |||.....|..|    |.:|   |:.....
  Rat     9 SPRSTS----LHAAAPDPKCR--------------SGGRRRRLTFHS----VFSA---SARGRRA 48

  Fly   689 NQEPQQSTSTPATTPTETPGSGELGPFGTNHAYPLTVSSLLSMASANQAAQACCVRDGIALKRRE 753
            ..:||.....||..|...|...|.      .|.|:  .:|.|..:|...|:|...|         
  Rat    49 RTKPQAEPPPPAAPPPPAPAPVEA------QAPPM--EALPSEPAAEAEAEAAAAR--------- 96

  Fly   754 MLASADVTPSVGTPATPTTAFKPFTCKLCLIDVEDVGEAMALQQCGCQFCIECMRAYVEFEISEG 818
                    |.....|....| :...|.|||:.:.. ..|..|..|..:.|.:|:|.|:..||||.
  Rat    97 --------PEEDEAAEGGGA-EEVECPLCLVRLPP-ERAPRLLSCPHRSCRDCLRHYLRLEISES 151

  Fly   819 AYEISCPDATCPAQGAISLPEIAN-------LTTTNLLKKHHRYRLNREIELDKTRTWCPRAGC- 875
            ...||||:.:          |..|       |....|:.|:..:.|.|.:..|....|||...| 
  Rat   152 RVPISCPECS----------ERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCG 206

  Fly   876 ETICTVGAAAQPGQSSVICQMDESPSTSQSYSPQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKD 940
            ..:...|.|:.|   .:.|:.:                                       .|:.
  Rat   207 YAVIAYGCASCP---KLTCERE---------------------------------------GCQT 229

  Fly   941 EFCGLCKKAYHPNISCD--------------------EFGRRLIADGQDDIGIPFDNELIKCCPM 985
            |||..||:.:|||.:||                    .:|:.   .|.||         ||.||.
  Rat   230 EFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQE---SGPDD---------IKPCPR 282

  Fly   986 CAVPIEK--DEGCAQMMCKRCKHVFCWYCLASLDDDFLLRHYDKGPCK---NKLGHSRASVVWHR 1045
            |:..|.|  |..|..|.|..|...|||.|:..:.|   |.:.....|.   .|....:..::|..
  Rat   283 CSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISD---LHYLSPSGCTFWGKKPWSRKKKILWQL 344

  Fly  1046 AQVIGIFAGFGILLLVASPLLLLAAPCIICCKCRGCTGSKI 1086
            ..:||...|..::..:|.|.:::..|..:        |.||
  Rat   345 GTLIGAPVGISLIAGIAIPAMVIGIPVYV--------GRKI 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33144NP_001188904.1 IBR 850..956 CDD:214763 21/106 (20%)
IBR <976..1014 CDD:279784 16/39 (41%)
Rnf19bXP_008762369.2 RING_Ubox 113..166 CDD:418438 20/63 (32%)
RING-HC finger (C3HC4-type) 113..160 CDD:319361 19/47 (40%)
IBR 181..245 CDD:214763 21/105 (20%)
IBR <276..314 CDD:396187 17/46 (37%)
AzlC <340..429 CDD:412452 10/46 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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