DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mat1 and AT4G30820

DIOPT Version :9

Sequence 1:NP_610605.1 Gene:Mat1 / 36130 FlyBaseID:FBgn0024956 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001328141.1 Gene:AT4G30820 / 829205 AraportID:AT4G30820 Length:190 Species:Arabidopsis thaliana


Alignment Length:153 Identity:40/153 - (26%)
Similarity:64/153 - (41%) Gaps:40/153 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 LEELENEHKKKKARDKQALIEELMYSGKDAAQIVTEFAEKAEKQREEE---KQLPPPKPANEFS- 225
            :|.:|.:.|:              ||.::|.||:...|.|||:.....   |..||...|:..| 
plant    69 VEAIEQKIKR--------------YSKENAEQIMINRARKAEELTAALAACKAKPPQTDADTSSN 119

  Fly   226 ----TGIKFGQTADPSLLPVPKSEEGPLFVYEPLVPFSEGPAMPPTNEIVSRGYIAHIRAETPQE 286
                .|..:||.:.|:.:       ||..|  |:|..:|.......:|...|     ::|    |
plant   120 HGVTAGTTYGQASRPTGM-------GPQPV--PIVGGAERQHYAMEDEATRR-----MKA----E 166

  Fly   287 NAGGFTSALACERALQEALQGLY 309
            .||||:..::..|||:||...::
plant   167 RAGGFSLEISKRRALEEAFASIW 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mat1NP_610605.1 cdk7 1..313 CDD:129661 40/153 (26%)
RING 3..47 CDD:302633
CDC37_N 66..175 CDD:296150 3/9 (33%)
Seryl_tRNA_N 127..215 CDD:299883 13/52 (25%)
AT4G30820NP_001328141.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1454155at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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