DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mat1 and mnat1

DIOPT Version :9

Sequence 1:NP_610605.1 Gene:Mat1 / 36130 FlyBaseID:FBgn0024956 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001006100.1 Gene:mnat1 / 450080 ZFINID:ZDB-GENE-041010-203 Length:309 Species:Danio rerio


Alignment Length:312 Identity:167/312 - (53%)
Similarity:228/312 - (73%) Gaps:8/312 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDQACPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFLKGSGACPECMVPLRRNNFRVQLFED 65
            ||||.|||||||||||||||||||||||||||||||:||::|||.|.:|..|||::|||||||||
Zfish     1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDMLFVRGSGNCVQCDTPLRKSNFRVQLFED 65

  Fly    66 PMVEKEVDIRRRILRDYNKREEDFASLAEYNDYLEEIEDIVYNLCNNIDIIETNKRIEAYKRDNR 130
            |.:.|||:||:::|:.|||||.||:||.|||||||::||||:||.||:|:..|.:::|.|:|||:
Zfish    66 PAIGKEVEIRKKVLKIYNKREFDFSSLTEYNDYLEQVEDIVFNLANNMDVEMTKQKMEQYQRDNK 130

  Fly   131 EVIQRNKTRVGRDEYALEEMLELEKVQEEARRKELEELENEHKKKKARDKQALIEELMYSGKDAA 195
            :||||||.::.|::..|||:|..|:...|.||.|..:.|....:.|.::||||::||..|...||
Zfish   131 DVIQRNKAKLTREQEELEELLLQEQQDSELRRLETLQEEQRQLQAKRKNKQALLDELENSKLPAA 195

  Fly   196 QIVTEFAEKA---EKQREEEKQLPPPKPANEFSTGIKFGQTADPSLLPVPKSEEGPLFVYEPLVP 257
            .::.:..::|   |.|.|::||  ..||.|.|||||..|||.  ||..|.:.|| .|:.|:||..
Zfish   196 VLLAQHKDRAAHLETQIEKQKQ--NVKPTNIFSTGIMMGQTV--SLASVSRVEE-VLYCYQPLYI 255

  Fly   258 FSEGPAMPPTNEIVSRGYIAHIRAETPQENAGGFTSALACERALQEALQGLY 309
            .:.||.:|..:::..:|::.|:||.:.|:.|||:||.|||.||:|:|..||:
Zfish   256 DTYGPPVPELDQLGRKGFLNHVRAASLQDQAGGYTSGLACHRAIQDAFSGLF 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mat1NP_610605.1 cdk7 1..313 CDD:129661 167/312 (54%)
RING 3..47 CDD:302633 38/43 (88%)
CDC37_N 66..175 CDD:296150 55/108 (51%)
Seryl_tRNA_N 127..215 CDD:299883 35/90 (39%)
mnat1NP_001006100.1 cdk7 1..307 CDD:129661 166/310 (54%)
RING 3..46 CDD:302633 38/42 (90%)
ATP-synt_B <166..>218 CDD:304375 17/53 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595527
Domainoid 1 1.000 188 1.000 Domainoid score I3256
eggNOG 1 0.900 - - E1_COG5220
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1821
Inparanoid 1 1.050 335 1.000 Inparanoid score I2389
OMA 1 1.010 - - QHG55364
OrthoDB 1 1.010 - - D1454155at2759
OrthoFinder 1 1.000 - - FOG0005635
OrthoInspector 1 1.000 - - oto38834
orthoMCL 1 0.900 - - OOG6_103797
Panther 1 1.100 - - LDO PTHR12683
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1502
SonicParanoid 1 1.000 - - X5285
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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