DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mat1 and Mnat1

DIOPT Version :9

Sequence 1:NP_610605.1 Gene:Mat1 / 36130 FlyBaseID:FBgn0024956 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_703202.1 Gene:Mnat1 / 266713 RGDID:628874 Length:309 Species:Rattus norvegicus


Alignment Length:314 Identity:168/314 - (53%)
Similarity:232/314 - (73%) Gaps:12/314 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDQACPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFLKGSGACPECMVPLRRNNFRVQLFED 65
            ||||.||||||||||||||||||||||||||||||||||::|:|.||||..|||::|||||||||
  Rat     1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFED 65

  Fly    66 PMVEKEVDIRRRILRDYNKREEDFASLAEYNDYLEEIEDIVYNLCNNIDIIETNKRIEAYKRDNR 130
            |.|:|||:||:::|:.||||||||.||.||||:|||:|:||:||.||:|:..|.|::|.|:::|:
  Rat    66 PTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENK 130

  Fly   131 EVIQRNKTRVGRDEYALEEMLELEKVQEEARRKELEELENEHKKKKARDKQALIEELMYSGKDAA 195
            :|||:||.::.|::..|||.||:|:.:.|.||..:::.|...:..|.::|||.::||..|....|
  Rat   131 DVIQKNKLKLTREQEELEEALEVERQESEQRRLFIQKEEELQQILKRKNKQAFLDELESSDLPVA 195

  Fly   196 QIVTEFAEKA---EKQREEEKQLPPPKPANEFSTGIKFGQTADPSLLPVPKSEEGPLFVYEPLVP 257
            .::.:..:::   |.|.|:.|.:.|.    .||||||.||..  ||.|:.|.||. |:.|:||..
  Rat   196 LLLAQHKDRSTQLEMQLEKPKSMKPV----TFSTGIKMGQQI--SLAPIQKLEEA-LYEYQPLQI 253

  Fly   258 FSEGPAMPPTNEIVSR-GYIAHIRAETPQENAGGFTSALACERALQEALQGLYY 310
            .:.||.: |..|::.| ||:.|:||.:||:.|||:||:|||.||||:|..||::
  Rat   254 ETCGPQV-PEQELLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDAFSGLFW 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mat1NP_610605.1 cdk7 1..313 CDD:129661 168/314 (54%)
RING 3..47 CDD:302633 38/43 (88%)
CDC37_N 66..175 CDD:296150 54/108 (50%)
Seryl_tRNA_N 127..215 CDD:299883 29/90 (32%)
Mnat1NP_703202.1 cdk7 1..308 CDD:129661 168/314 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353400
Domainoid 1 1.000 179 1.000 Domainoid score I3434
eggNOG 1 0.900 - - E1_COG5220
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1821
Inparanoid 1 1.050 332 1.000 Inparanoid score I2339
OMA 1 1.010 - - QHG55364
OrthoDB 1 1.010 - - D1454155at2759
OrthoFinder 1 1.000 - - FOG0005635
OrthoInspector 1 1.000 - - oto95956
orthoMCL 1 0.900 - - OOG6_103797
Panther 1 1.100 - - LDO PTHR12683
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5285
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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